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. Author manuscript; available in PMC: 2018 Nov 15.
Published in final edited form as: Cell Rep. 2018 Sep 25;24(13):3593–3606.e10. doi: 10.1016/j.celrep.2018.08.091
REAGENT or RESOURCE SOURCE IDENTIFIER

Antibodies

Total Rodent OXPHOS WB Antibody Cocktail Abcam Cat# ab110413; RRID: AB_2629281

Chemicals, Peptides, and Recombinant Proteins

Tris salt of phosphocreatine Millipore Sigma Cat# P1937
CAS# 108321–17-1
Tris salt of ATP Millipore Sigma Cat# A9062
CAS# 102047–34-7
Potassium pyruvate Combi-Blocks Cat# QA-1116
CAS# 4151–33-1
Potassium NADP+ Ark-Pharm, Inc Cat# AK671068
Creatine kinase from rabbit muscle Millipore Sigma Cat# 10736988001
Percoll solution Millipore Sigma Cat# P1937
CAS#108321–17-1
Amplex Ultra Red Reagent (AUR) ThermoFisher Scientific Cat# A36006
CelLytic M Millipore Sigma Cat# C2978
Tetramethylrhodamine methyl ester (TMRM) ThermoFisher Scientific Cat# T668
Phosphoenoyl-pyruvate Millipore Sigma Cat# 10108294001;
CAS# 4265–07-0
UK5099 Millipore Sigma Cat# PZ0160;
CAS# 56396–35-1
Auranofin Millipore Sigma Cat# A6733;
P1,P5-Di(adenosine-5ʹ)pentaphosphate Millipore Sigma Cat# D6392;
CAS# 75522–97-3
Oligomycin Millipore Sigma Cat# 75351
CAS# 579–13-5
Rotenone Millipore Sigma Cat# R8875
CAS# 83–79-4
Potassium cyanide Millipore Sigma Cat# 60178
CAS# 151–50-8
Carbonyl cyanide 4-(trifluoromethoxy)phenylhydrazone (FCCP) Millipore Sigma Cat# C2920
CAS# 370–86-5
Peroxidase from horseradish (HRP) Millipore Sigma Cat# P8375
CAS# 9003–99-0
Superoxide dismutase (SOD) Millipore Sigma Cat# S9697
CAS# 9054–89-1
Glucose-6-phosphate Dehydrogenase (G6PDH) Millipore Sigma Cat# G6378
CAS# 9001–40-5
Malate dehydrogenase (MDH) Millipore Sigma Cat# 442610-M
CAS# 9001–64-3
Pyruvate Kinase/Lactic Dehydrogenase enzymes from rabbit muscle Millipore Sigma Cat# P0294
Hexokinase Millipore Sigma Cat# H4502
CAS# 9002–07-7
Trypsin from porcine pancreas (Trypsin) Millipore Sigma Cat# T4799
CAS# 9001–51-8
Creatine Monohydrate Millipore Sigma Cat# C3630
CAS# 6020–87-7
Octanoyl-L-carnitine Millipore Sigma Cat# 50892
CAS# 25243–95-2
Malic acid (Malate) Millipore Sigma Cat# M1000
CAS# 97–67-6
Glutamic acid (Glutamate) Millipore Sigma Cat# G1501
CAS# 6382–01-0
Succinic acid (Succinate) Millipore Sigma Cat# S3674
CAS# 110–15-6
α-ketoglutaric acid (AKG) Millipore Sigma Cat# K1750
CAS# 328–50-7
3-Methyl-2-oxopentanoic acid (α -keto-β-methylvalerate) Millipore Sigma Cat#198978;
CAS#3715–31-9
Isocitrate Millipore Sigma Cat#58790;
CAS#20226–99-7
Adenosine diphosphate (ADP) Millipore Sigma Cat# A5285
CAS# 72696–48-1
Tetraphenylphosphonium (TPP+) Millipore Sigma Cat# 218790
CAS# 2001–45-8
NADH Millipore Sigma Cat# N4505
CAS# 104809–32-7
Nicotinamide adenine dinucleotide (NAD+) Millipore Sigma Cat# N1636
CAS# 53–84-9
L-Aspartic acid (Aspartate) Millipore Sigma Cat# A9256
CAS# 56–84-8
Acetoacetyl-CoA Millipore Sigma Cat# A1625
CAS# 1420–36-6
Coenzyme A Millipore Sigma Cat# C3019
CAS# 18439–24-2
Thiamine pyrophosphate Millipore Sigma Cat# C8754
CAS# 154–87-0
Pyridoxal 5′-phosphate Millipore Sigma Cat# P9255
CAS# 853645–22-4

Experimental Models: Organisms/Strains

C56BL/6NJ mice The Jackson Laboratory Stock #005304

Software and Algorithms

Jupyter notebook containing the aΔΨ ustment calculations interspersed with procedural descriptions needed to calculate ΔGATP. N/A https://github.com/dmpio/bioenergeticcalculators/blob/master/jupyter_notebook/creatine-kinase-clamp.ipynb
Web-based ΔGATP calculator N/A https://dmpio.github.io/bioenergeticcalculators/ck_clamp/

Other

Ultracentrifuge tubes for mitochondrial percoll purifications Beckman Coulter Cat# 344061
Swinging bucket ultracentrifuge rotor for mitochondrial percoll purifications – Surespin 630 with tube adapters ThermoFisher Scientific Cat# 79363
QuantaMaster Spectrofluorometer Horiba Scientific Cat# QM-400