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. 2018 Sep 17;46(20):10740–10756. doi: 10.1093/nar/gky825

Table 2.

Single turnover kinetic data for WT and I260Q pol β on single-nucleotide gapped DNA

Sequencea Protein k pol (s−1) K d(dNTP) (μM) Dk pol b DKd (dNTP) c Efficiencyd (μM−1s−1) Fidelitye X-foldf
G:dC WT 12.0±0.9 1.5±0.6 8
I260Q 3.6±0.08 0.6±0.1 6
G:dA WT 0.134±0.008 365±59 90 243 3.7 × 10−4 21623
I260Q 0.095±0.004 16±3 38 27 5.9 × 10−3 1011 21.4
T:dA WT 12.2±0.6 5.8±0.9 2.1
I260Q 5.5±0.21 1.9±0.3 2.9
T:dC WT 0.14±0.01 427±66 87 72 3.3 × 10−4 6364
I260Q 0.09±0.003 11.5±2.5 61 6 7.8 × 10−3 372 17.1

aThe primer-template is extG or extT, with templating base G or T; templating base:incoming dNTP is shown.

bDiscrimination of kpol= kpol(correct)/ kpol(incorrect).

cDiscrimination of Kd(dNTP) = Kd(dNTP)(incorrect)/ Kd(dNTP)(correct).

dEfficiency = kpol/Kd(dNTP).

eFidelity = (correct efficiency + incorrect efficiency)/incorrect efficiency.

f X-fold = WT fidelity/I260Q fidelity.