Figure 2.

A global landscape of DNA binding events for uncharacterized TFs during growth at active conditions. (A) Binding sites identified by ChIP-exo. Verified uncharacterized TFs were labeled with colored circles. The numbers in the parentheses represent the number of identified binding sites for individual uncharacterized TFs. Gray circles represent uncharacterized TFs without binding peaks under the growth conditions used, which include YjhU, YjdC, YihY, YiaG, YagI, and YchA. (B) The sequence motifs for six uncharacterized TFs. The height of the letters (in bits on the y-axis) represents the degree of conservation at a given position within the aligned sequence set, with perfect conservation being 2 bits. Arrows above motif indicate the presence of palindromic sequences.