Table 2.
Enriched functional categories among DEGs.
| GUN + vs. PAO1+ | GUN + vs. PAO1 |
|---|---|
| Down-regulated DEGs a | |
| Ribosome (45) | Ribosome (39) |
| Purine metabolism (19) | Oxidative phosphorylation (20) |
| Carbon metabolism (24) | Purine metabolism (18) |
| RNA degradation (7) | Metabolic pathways (90) |
| Denitrification (7) | Arginine and proline metabolism (13) |
| Penthose phosphate cycle (8) | RNA degradation (6) |
| Up-regulated DEGs a | |
| Quorum sensing (21) | Quorum sensing (16) |
| Phenazine biosynthesis (7) | Pyoverdine synthesis (6) |
| Xcp type II secretion system (5) | Apr type I secretion system (4) |
| Apr type I secretion system (5) | Phenazine biosynthesis (6) |
| Pyoverdine synthesis (6) | Xcp type II secretion system (5) |
| Bacterial chemotaxis (10) | Nitrogen metabolism (9) |
| AMBb biosynthesis (3) | Bacterial chemotaxis (8) |
aCategories are ordered according to increased adjusted probability values. The number of DEGs belonging to each category is indicated in brackets.
bAMB, L-2-amino-4-methoxy-trans-3-butenoic acid.