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. 2018 Nov 15;8:16877. doi: 10.1038/s41598-018-34758-0

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© The Author(s) 2018

Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/.

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Phylogenomics and protein-coding gene families of pinnipeds. (A) Species tree of 12 terrestrial and marine mammals constructed by the maximum-likelihood method. (B) Orthologous gene clusters in three pinnipeds. (C) Number of intact (coverage ≥ 90%) and partial (coverage < 90%) genes that belong to Protocadherin gene families, named family 34 in our dataset (Dol, dolphin; Man, manatee; Min, Minke whale; Nor, northern fur seal; Spo, spotted seal; Ste, Steller sea lion).