Table 3.
Protein-protein sequence comparison.
Used protein sequence*# | Blastp-best hit | Identity (%) | Conserved protein domain family |
---|---|---|---|
GMAS (gmaS; METDI2327) | type III glutamate-ammonia ligase Bosea vaviloviae (WP_069689945.1, [432 aa]) | 78 | Family: glutamine synthetase, type III |
NMGS I (mgsA; METDI2324) | glutamine amidotransferase Rhizobiaceae bacterium (WP_114956843.1, [300 aa]) | 72 | Glutamine amidotransferases class-II (Gn-AT)_GlxB-type; Glutamate synthase domain 1 (GltB1) |
NMGS II (mgsB; METDI2325) | protein glxC Ancylobacter rudongensis (WP_091437349.1, [225 aa]) | 80 | Glutamate synthase domain 3 (GltB3) |
NMGS III (mgsC; METDI2326) | FMN-binding glutamate synthase family protein Novosphingobium acidiphilum (WP_028640033.1, [442 aa]) | 88 | Glutamate synthase (GltS) FMN-binding domain; Glutamate synthase domain 2 (GltB2) |
Protein sequences of GMAS, NMGS (I, II, III) of M. extorquens DM4 were analyzed within the bacterial taxid:2 using the algorithm blastp (Altschul et al., 1990). The best hits for each protein BLAST (lowest e-value) are shown. The predicted protein function, conserved protein domain family and the sequence identity are shown.
Amino acid sequence analysis was performed with blastp (https://blast.ncbi.nlm.nih.gov/Blast.cgi).
Search within the bacterial taxid:2, excluding the genus Methylobacterium.