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Single nucleotide polymorphisms (SNPs) selected within the genomes of strains 63140 and 1874c5 for recombination detection assays
| Target gene | Target length sequenced (bp) | Codon and amino acid for straina: |
Transitionb | |
|---|---|---|---|---|
| 63140 | 1874c5 | |||
| UL54 | 98 | CAC, Val | CAT, Val | S |
| ORFE | 102 | GTT, Gln | GCT, Arg | NS |
| UL36 | 105 | TGC, Thr | TGT, Thr | S |
| UL6 | 175 | CGG, Ala | TGG, Thr | NS |
| ORF1 | 90 | TTA, Leu | CTA, Leu | S |
| US9 | 67 | ACA, Thr | ATA, Ile | NS |
Modified nucleotide shown in bold.
S, synonymous; NS, nonsynonymous.
