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. 2018 Nov 15;18:169. doi: 10.1186/s12862-018-1290-2

Table 1.

Basic assembly statistics (> 300 bp) compared to existing small-spotted catshark transcriptomes

KEA MEA RAW MCF HTMCF
Total base count 45,214,552 110,464,397 275,457,098 275,410,367 80,066,015
Total contig count 58,273 86,006 388,800 387,579 102,228
N50a contig length 965 2316 786 791 969
L50b contig count 12,721 13,518 89,641 88,973 20,814
GC content (%) 45.69 43.9 42.09 42.1 42.03

aN50: the length of the shortest contig included when the least number of contigs are used to make up 50% of the total assembly length

bL50: the total contig count when the least number of contigs are used to make up 50% of the total assembly length