Table 2.
RAW, MCF and HTMCF, BUSCOs compared to existing catshark transcriptomes
| KEA | MEA | RAW | MCF | HTMCF | |
|---|---|---|---|---|---|
| Vertebrata (2586 BUSCOs) | |||||
| Complete Single-copy BUSCOs | 1392 (53.83%) | 1257 (48.61%) | 997 (38.55%) | 1000 (38.67%) | 1533 (59.28%) |
| Complete Duplicated BUSCOs | 164 (6.34%) | 788 (30.47%) | 434 (16.78%) | 435 (16.82%) | 188 (7.27%) |
| Fragmented BUSCOs | 641 (24.79%) | 277 (10.71%) | 852 (32.95%) | 855 (33.06%) | 477 (18.45%) |
| Missing BUSCOs | 389 (15.04%) | 264 (10.21%) | 303 (11.72%) | 296 (11.45%) | 388 (15%) |
| Metazoa (978 BUSCOs) | |||||
| Complete Single-copy BUSCOs | 735 (75.15%) | 628 (64.21%) | 583 (59.61%) | 588 (60.12%) | 787 (80.47%) |
| Complete Duplicated BUSCOs | 87 (8.9%) | 300 (30.67%) | 248 (25.36%) | 238 (24.34%) | 75 (7.67%) |
| Fragmented BUSCOs | 116 (11.86%) | 33 (3.37%) | 127 (12.99%) | 130 (13.29%) | 78 (7.97%) |
| Missing BUSCOs | 40 (4.09%) | 17 (1.74%) | 20 (2.04%) | 22 (2.25%) | 38 (3.89%) |