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. 2018 Nov 1;34(11):982–992. doi: 10.1089/aid.2018.0062

Appendix Table 1.

Definitions of Metabolizer Categories and Number of Participants with Each SNP Combination

  Allele copy numbers defining each SNP combination and metabolizer category
SNP Fast Intermediate Slow Not categorizeda
Ordinal level of EFV metabolismb (1 = fastest, 10 = slowest) 1 2 3 4 5 6 7 8 9 10
rs3745274 (516G>T) 0 0 0 1 0 1 0 2 1 0 1 1
rs28399499 (983T>C) 0 0 0 0 1 0 1 0 1 2 0 1
rs4803419 (15582C>T) 0 1 2 0 0 1 1 0 0 0 2 1
No. of participants in whole study by SNP combination 206 45 6 249 59 43 2 91 42 1 1 1
No. of participants in final cohort by SNP combination 69 9 2 77 22 18 0 30 14 0 1c 0d
a

Two SNP combinations were unable to be categorized as fast, intermediate, or slow based on the previously published pharmacokinetic framework,10 and metabolizer strata were imputed for these SNP combinations.

b

Based on previously published pharmacokinetic modeling study by Holzinger et al.9

c

Imputed as intermediate metabolize.

d

Imputed as slow metabolizer.

SNP, single-nucleotide polymorphism.