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. 2016 Aug 31;83(1):1163. doi: 10.4102/ojvr.v83i1.1163

TABLE 4.

Genetic distances between peste-des-petits-ruminants virus N GenBank Nigerian sequences and the recent Nigerian sequences, using a general time-reversible model with a gamma-shaped distribution of rate variation across sites (GTR + G).

Number Nigerian sequences NG VACNVRI751 DQ840160 75 1Nigeria DQ840161 75 2 Nigeria DQ840162 75 3 Nigeria DQ840164 76 1 Nigeria Mean ± standard deviation
1 NG OY 2013 00213 0.0745 0.069 0.0479 0.0523 0.0674 0.0062 ± 0.0115
2 NG PL 2010 00018 0.0805 0.0748 0.0587 0.0633 0.0633 0.0068 ± 0.0091
3 NG SO 2010 00079 0.0805 0.0748 0.0587 0.0633 0.0633 0.0068 ± 0.0091
4 NG OY 2013 00205 0.0805 0.0748 0.0589 0.0633 0.0633 0.0068 ± 0.0091
5 NG ON 2010 00230 - 0.0415 0.0398 0.0443 0.0004 0.0032 ± 0.0187
6 NG VACNVRI751 - 0.0415 0.0398 0.0443 0.0004 0.0032 ± 0.0187
7 NG PL 2010 00017 0.0198 0.0189 0.0164 0.0169 0.0185 0.0181 ± 0.0142
8 NG SO 2010 00072 0.0198 0.0189 0.0164 0.0169 0.0185 0.0181 ± 0.0142
9 NG PL 2010 00014 0.0198 0.0189 0.0164 0.0169 0.0185 0.0181 ± 0.0142
10 NG BA 2013 00177 0.0198 0.0189 0.0164 0.0169 0.0185 0.0181 ± 0.0142
11 NG OY 2013 00207 0.0198 0.0189 0.0164 0.0169 0.0185 0.0181 ± 0.0142
12 NG KN 2010 00096 0.0183 0.0175 0.0015 0.0156 0.0172 0.0167 ± 0.0137
13 NG AD 2010 00151 0.0183 0.0175 0.0015 0.0156 0.0172 0.0167 ± 0.0137
14 NG KD 2010 00119 0.0196 0.0188 0.0174 0.0018 0.0196 0.0187 ± 0.0097
15 NG BA 2013 00170 0.0196 0.0188 0.0174 0.0018 0.0196 0.0187 ± 0.0097
16 NG LA 2010 00184 0.0018 0.0172 0.0147 0.0152 0.0168 -
17 NG KD 2010 00118 0.0018 0.0172 0.0147 0.0152 0.0168 0.0164 ± 0.0137
18 NG AD 2010 00152 0.0018 0.0172 0.0147 0.0152 0.0168 0.0164 ± 0.0137
19 NG BA 2010 00163 0.0018 0.0172 0.0147 0.0152 0.0168 0.0164 ± 0.0137
20 NG NI 2010 00058 0.0173 0.0165 0.0014 0.0146 0.0161 0.0157 ± 0.0135
21 NG OY 2013 00211 0.0186 0.0178 0.0153 0.0158 0.0174 0.0170 ± 0.0140
22 NG PL 2010 00012 0.0173 0.0165 0.0014 0.0146 0.0161 0.0157 ± 0.0135
23 NG OY 2010 00218 0.0183 0.0175 0.0015 0.0156 0.0171 0.0167 ± 0.0137
24 NG AK 2013 00320 0.0183 0.0175 0.0015 0.0156 0.0171 0.0167 ± 0.0137
25 NG LA 2010 00185 0.0183 0.0175 0.0015 0.0156 0.0171 0.0167 ± 0.0137
26 NG LA 2010 00192 0.0183 0.0175 0.0015 0.0156 0.0171 0.0167 ± 0.0137
27 NG AK 2010 00316 0.0183 0.0175 0.0015 0.0156 0.0171 0.0167 ± 0.0137
28 NG OY 2010 00219 0.0183 0.0175 0.0015 0.0156 0.0171 0.0167 ± 0.0137
29 NG AK 2013 00310 0.0184 0.0176 0.0151 0.0157 0.0172 0.0168 ± 0.0138
30 HQ131921 Soba Khartoum KHSUD08 0.0165 0.0157 0.0133 0.0139 0.0154 0.0150 ± 0.0131
31 KC207871 Pakistan 2012 0.0202 0.0193 0.0167 0.0016 0.0189 0.0182 ± 0.0178
32 DQ840170 88 Guinea 0.0235 0.0226 0.0213 0.0206 0.0235 0.0223 ± 0.0131
33 DQ840169 Dorcas86 UAE 0.0308 0.0297 0.0281 0.0288 0.0306 0.0296 ± 0.0115