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. Author manuscript; available in PMC: 2019 May 15.
Published in final edited form as: Clin Cancer Res. 2018 May 29;24(22):5724–5734. doi: 10.1158/1078-0432.CCR-17-3364

Table 3. Biological validation in tissues from U.S. and S. Korea patient cohorts.

Metrics are shown for discrimination of gastric adenocarcinoma from histologically normal gastric mucosa by the top 16 methylated DNA markers, including areas under the receiver operator curves (AUCs) and sensitivites at 90% specificity cuttoffs. Specificity cutoffs were based on marker levels in histologically normal mucosa from healthy controls in U.S. cohort and from biopsies synchronous with gastric cancer in S. Korea cohort.

U.S. Cohort South Korea Cohort

AUC (95% CI) Sensitivity, % (95% CI) AUC (95% CI) Sensitivity, % (95% CI)

ARGEF4 0.97 (0.93–1) 94 (81–99) 0.82 (0.72–0.92) 72 (58–84)

ELMO1 0.97 (0.93–1) 94 (81–99) 0.92 (0.86–0.99) 88 (76–95)

ABCB1 0.98 (0.96–1) 91 (77–98) 0.83 (0.74–0.92) 78 (64–88)

BMP3 0.94 (0.88–1) 89 (73–97) 0.84 (0.75–0.94) 80 (66–90)

SP9 0.95 (0.91–1) 91 (77–98) 0.66 (0.53–0.79) 58 (43–72)

CLEC11A 0.95 (0.92–1) 94 (81–99) 0.78 (0.66–0.89) 68 (53–80)

EMX1 0.96 (0.91–1) 91 (77–98) 0.77 (0.65–0.89) 76 (62–87)

ST8SIA1 0.95 (0.89–1) 91 (77–98) 0.85 (0.76–0.93) 72 (58–84)

CD1D 0.94 (0.88–0.99) 89 (73–97) 0.91 (0.84–0.98) 86 (73–94)

SFMBT2 0.93 (0.87–0.99) 86 (70–95) 0.96 (0.92–1) 90 (78–97)

CYP26C1 0.95 (0.89–1) 91 (77–98) 0.84 (0.74–0.93) 74 (60–85)

PKIA 0.94 (0.89–1) 89 (73–97) 0.89 (0.82–0.97) 80 (66–90)

NDRG4 0.88 (0.81–0.96) 77 (60–90) 0.84 (0.77–0.92) 74 (60–85)

ZNF569 0.94 (0.88–1) 91 (77–98) 0.81 (0.70–0.91) 70 (55–82)

PPP2R5C 0.90 (0.83–0.97) 80 (63–92) 0.68 (0.56–0.80) 62 (47–75)

C13ORF18 0.83 (0.72–0.93) 74 (57–88) 0.85 (0.78–0.92) 72 (58–84)
Marker Panel 0.99 (0.96–1) 100 (90–100) 0.95 (0.89–1) 94 (83–99)