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. Author manuscript; available in PMC: 2019 Dec 1.
Published in final edited form as: Hum Mutat. 2018 Sep 17;39(12):1995–2007. doi: 10.1002/humu.23639

Table 2.

Calculation of patients’ severity score1

Family ID H G B A E D C
Substitution p.L138R p.T142I p.G249D p.R257Q p.P333L p.E335D p.R340C
Age at Diagnosis Age Score Age Score Age Score Age Score Age Score Age Score Age Score
Optic atrophy 15 yrs (0.8) <1 yrs (1) 8 yrs (1) <1 yrs (1) <1 yrs (1) 1.5 yrs (1) 2 yrs (1)
Cerebellar atrophy 15 yrs (0.8) <1 yrs (1) N/A (0) N/A (0) <1 yrs (1) 1.5 yrs (1) 28 yrs (0.6)
Neuropathy 15 yrs (0.8) <1 yrs (1) 43 yrs (0.2) 6 yrs (1) <1 yrs (1) 5 yrs (1) 14 yrs (0.8)
Wheel chair bound 15 yrs (0.8) N/A (1) N/A (0) N/A (0) N/A (1) 15 yrs) (0.8) N/A (0)
Early lethality N/A (0) 1.1 yrs (1) N/A (0) N/A (0) <1 yrs (1) N/A (0) N/A (0)
Severity score 3.2 5 1.2 2 5 3.8 2.4
Average protein stability 0.4 0.15 0.85 0.78 0.33 0.38 0.50
1

The presence of each clinical feature counts for 1 point if reported within the first decade of life, while 0.2 points were subtracted for each subsequent decade. For example, our patient developed optic atrophy and neuropathy within the first decade of life [1 optic atrophy + 1 neuropathy = 2.0 points], while the proband possessing the G249D variant developed optic atrophy in the first decade of life [1 point] and neuropathy/spasticity four decades later [1 - (0.2 × 4 decades) = 0.2 point] for a cumulative score [1 optic atrophy + 0.2 neuropathy = 1.2 points]. Early lethality (death before 2 years of age), counted for the maximum 5 points regardless of whether or not the patient presented with all of the above criteria, the rationale being that the lethal cases are always the most severe.