Fig. 5.

Alignment of BTx623 maps against in-silico maps of the BTx623 reference assembly. Large inversions were detected on chromosomes 6 and 7 after aligning the BTx623 DLS map to in silico maps derived from the v3.0.1 public BTx623 assembly. A third inversion was detected on chromosome 5 while a separate inversion originally detected on chromosome 9 (Fig. 2) was absent in BTx623. Chromosomes are listed in numerical order. Regions in green are stretches of random nucleotides in the reference assembly. Regions in yellow exhibit breaks in collinearity between the two maps