Table 2.

Assembled transcripts with best match with known full-length DAL19 transcript isoforms.

DAL19 transcript	Length of DAL19 transcript	Assembly	Similarity	CIGAR
DAL19_αψδ	842	Oases	0.77	103S305M1D347 M405S
DAL19_αψγ	813	Oases	0.87	103S13M1I291M1 D241M105I 267M139S
DAL19_βψδ	1095	Oases	0.80	872M405S
DAL19_βψγ	1067	Oases	0.97	1033M139S
DAL19_αψδ	842	Trinity	0.92	267S774M62S
DAL19_αψγ	813	Trinity	0.92	267S746M142S
DAL19_βψδ	1095	Trinity	0.68	274S767M62S
DAL19_βψγ	1067	Trinity	0.39	7M1I1M1I23M2I 12M4D234M2I3M 1D7M1D16M1D2M1I 209M310S
DAL19_αψδ	842	cortexpy/kallisto	1.00	110S842M52S
DAL19_αψγ	813	cortexpy/kallisto	1.00	110S13M1I800M139S
DAL19_βψδ	1095	cortexpy/kallisto	0.92	1008M52S
DAL19_βψγ	1067	cortexpy/kallisto	0.45	177S31M6D41M2D4 M1D4M5I2M4I3M1I8M 2I10M3I5M3I2M1I35 M2I8M2D1M2D4 72M524S
DAL19_αψδ	842	Nine bud samples	1.00	81S842M52S
DAL19_αψγ	813	Nine bud samples	1.00	81S13M1I800M69S
DAL19_βψδ	1095	Nine bud samples	0.96	1050M12S
DAL19_βψγ	1067	Nine bud samples	0.86	920M

For each DAL19 transcript and each assembly the shortest assembled transcript with the longest sequence match to the DAL19 transcript is reported. Assembly: name of assembly tool that generated the transcripts (see Assembly, Evaluation, and Visualization of DAL19 Transcripts). Similarity: number of base matches to the DAL19 transcript divided by the number of bases in the DAL19 transcript. CIGAR: CIGAR string of transcript alignment to the DAL19 transcript in SAMv1 format.