Table 2.
Kd values of protein–protein interactions within the posttranslational cpSRP-pathway of Arabidopsis thaliana
| Interaction | Method | Kd [µM] | References |
|---|---|---|---|
| cpSRP43/Alb3 | |||
| 43/Alb3 C-terminus | FA | 12–18 | Liang et al. (2016) |
| 43/Alb3 C-terminus | ITC | 5.1 | Horn et al. (2015) |
| 43/Alb3 C-terminus | ITC | 9.7–13.2 | Falk et al. (2010); Falk and Sinning (2010a, 2010b) |
| 43/Alb3 C-terminus | ITC | 0.094 | Lewis et al. (2010) |
| cpSRP43/LHCP | |||
| 43/LHCP | LS | 0.17/1.5 | Liang et al. (2016) |
| 43/LHCP + 54M | 0.26 | ||
| 43/LHCP | FA | 0.14–0.3 | Jaru-Ampornpan et al. (2010) |
| 43/L18 | ITC | 0.322 | Gao et al. (2015) |
| 43/L18 + RRKRp10 | 0.107 | ||
| 43/L18 | ITC | 1.17 | Stengel et al. (2008) |
| 43/L11 | FA | 0.022 | Liang et al. (2016) |
| 43/L11 + Alb3 C-terminus | 0.011 | ||
| cpSRP43/cpSRP54 | |||
| 43/54 | MST | 0.05 | Ziehe et al. (2016) |
| 43/54 | FCS | 0.095 | Gao et al. (2015) |
| 43/54M | SPR | 0.0025 | Hermkes et al. (2006) |
| cpSRP54/cpFtsY | |||
| 54/FtsY - PG | FRET | 2.34 | Chandrasekar and Shan (2017) |
| 54/FtsY + PG | 0.13 | ||
| 54/FtsY* | FRET | 0.77 | Chandrasekar et al. (2017) |
| 54NG/FtsY* | 12 | ||
Enlisted are the dissociation constants (Kd values) of protein complexes of the posttranslational cpSRP-pathway. Additionally, the methods by which the Kd values were determined as well as possible variations of the experimental settings are shown
FA fluorescence anisotropy, FCS fluorescence correlation spectroscopy, FRET forster resonance energy transfer, ITC isothermal titration calorimetry, LA light scattering, MST microscale thermophoresis, SPR surface plasmon resonance spectroscopy
* measured in the presence of 0.01 % Nikkol (mimicking of the effect of lipids)