Table 4.
The dysregulated co-expression pairs retrieved for the 19 PCGs, and the number of the corresponding co-expressed lncRNA (namely “degree”)
| AT/RT vs. KRT | Degree | AT/RT vs. Brain | Degree | KRT vs. Kidney | Degree |
|---|---|---|---|---|---|
| ATIC | 5 | ATIC | 6 | GNAS | 7 |
| FANCA | 7 | GNAS | 13 | NONO | 7 |
| NONO | 7 | NONO | 19 | NPM1 | 10 |
| NPM1 | 11 | PBRM1 | 21 | PBRM1 | 8 |
| PBRM1 | 6 | PCM1 | 6 | PCM1 | 13 |
| PCM1 | 8 | PDE4DIP | 11 | PTEN | 11 |
| PDE4DIP | 9 | PTEN | 15 | RPL10 | 11 |
| PTEN | 13 | RPL10 | 9 | RPL22 | 12 |
| RPL10 | 7 | RPL5 | 6 | RPL5 | 14 |
| RPL5 | 8 | SF3B1 | 26 | SF3B1 | 12 |
| SF3B1 | 13 | SUZ12 | 21 | SRSF3 | 5 |
| SMARCE1 | 5 | ZMYM2 | 26 | TCF3 | 7 |
| SRSF3 | 6 | RPL22 | 4 | ZMYM2 | 12 |
| SUZ12 | 5 | NPM1 | 3 | DDB2 | 3 |
| TCF3 | 8 | DDB2 | 2 | PDE4DIP | 3 |
| ZMYM2 | 13 | SRSF3 | 2 | SMARCE1 | 3 |
| RPL22 | 4 | TCF3 | 2 | SUZ12 | 2 |
| GNAS | 2 | FANCA | 1 | ATIC | 1 |
| DDB2 | 1 | SMARCE1 | 1 | FANCA | 1 |