Table I. Expression levels of transcripts encoding enzymes associated with arginine metabolism and the production of NO.
RNA-Seq |
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Sheep |
Goat |
Cattle |
Buffalo |
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Gene Name | Description | 0 h | 7 h | 0 h | 7 h | 0 h | 7 h | 0 h | 7 h |
ARG1 | Arginase 1 | 0.04 | 0.05 | 2.64 | 2.73 | 6.05 | 5.84 | 0.02 | 0.01 |
ARG2 | Arginase 2 | 7.40 | 56.27 | 11.82 | 41.06 | 48.48 | 347.99 | 30.06 | 153.54 |
ASL | Argininosuccinate lyase | 31.48 | 14.75 | 25.40 | 17.78 | 38.21 | 17.99 | 19.72 | 6.50 |
ASS1 | Argininosuccinate synthase 1 | 19.39 | 10.18 | 4.38 | 3.72 | 10.71 | 7.65 | 0.05 | 0.32 |
GCH1 | GTP cyclohydrolase 1 | 17.14 | 32.88 | 8.31 | 10.15 | 22.94 | 86.98 | 13.66 | 10.90 |
NOS2 | NO synthase 2, inducible | 0.55 | 19.09 | 3.78 | 19.69 | 2.14 | 901.20 | 3.25 | 301.37 |
OAT | Ornithine aminotransferase | 362.00 | 324.62 | 164.61 | 167.15 | 1166.67 | 854.75 | 204.40 | 142.74 |
ODC1 | Ornithine decarboxylase 1 | 92.12 | 269.73 | 340.63 | 376.01 | 45.46 | 18.26 | 119.02 | 53.83 |
PTS | 6-pyruvoyltetrahydropterin synthase | 17.49 | 13.66 | 62.01 | 62.61 | 27.53 | 11.91 | 36.36 | 16.32 |
SLC3A2 | Solute carrier family 3, member 2 | 161.19 | 167.79 | 209.91 | 210.11 | 98.20 | 62.87 | 168.22 | 146.74 |
SLC7A1 | Solute carrier family 7, member 1 | 7.91 | 10.02 | 38.08 | 45.94 | 7.37 | 6.99 | 19.95 | 49.59 |
SLC7A2 | Solute carrier family 7, member 2 | 0.01 | 0.04 | 5.88 | 15.73 | 0.04 | 0.18 | 0.18 | 2.03 |
SLC7A5 | Solute carrier family 7, member 5 | 9.01 | 21.67 | 115.47 | 106.67 | 5.83 | 3.46 | 7.74 | 7.46 |
SLC7A7 | Solute carrier family 7, member 7 | 283.90 | 161.32 | 109.13 | 60.78 | 220.58 | 120.25 | 114.72 | 103.68 |
SPR | Sepiapterin reductase | 21.00 | 13.80 | 78.29 | 124.30 | 20.47 | 4.60 | 37.28 | 13.15 |
RNA-Seq | CAGE | ||||||||
Horse | Pig | Rat | Human | ||||||
Gene Name | Description | 0 h | 7 h | 0 h | 7 h | 0 h | 7 h | 0 h | 7 h |
ARG1 | Arginase 1 | 0.10 | 0.05 | 70.62 | 379.11 | 76.63 | 1041.60 | 0.00 | 0.00 |
ARG2 | Arginase 2 | 119.23 | 59.72 | 13.56 | 11.91 | 3.35 | 1.88 | 3.10 | 1.30 |
ASL | Argininosuccinate lyase | 24.06 | 14.48 | 13.93 | 10.35 | 69.63 | 50.24 | 5.80 | 0.70 |
ASS1 | Argininosuccinate synthase 1 | 25.85 | 20.34 | 0.02 | 0.04 | 2.38 | 250.12 | 0.00 | 0.00 |
GCH1 | GTP cyclohydrolase 1 | 24.77 | 31.89 | 9.82 | 9.67 | 24.17 | 189.57 | 0.70 | 391.00 |
NOS2 | NO synthase 2, inducible | 0.00 | 0.01 | 0.66 | 1.77 | 59.03 | 4961.79 | 0.00 | 0.00 |
OAT | Ornithine aminotransferase | 103.56 | 68.81 | 95.74 | 83.74 | 104.93 | 82.10 | 83.00 | 57.00 |
ODC1 | Ornithine decarboxylase 1 | 98.48 | 39.73 | 241.26 | 195.93 | 64.55 | 45.63 | 5.30 | 1.30 |
PTS | 6-pyruvoyltetrahydropterin synthase | 27.98 | 16.30 | 143.49 | 141.30 | 11.51 | 13.01 | 0.50 | 0.00 |
SLC3A2 | Solute carrier family 3, member 2 | 168.35 | 120.18 | 238.46 | 248.84 | 191.23 | 289.86 | 115.00 | 123.00 |
SLC7A1 | Solute carrier family 7, member 1 | 13.27 | 9.72 | 5.45 | 4.68 | 20.02 | 14.00 | 0.00 | 0.00 |
SLC7A2 | Solute carrier family 7, member 2 | 0.01 | 0.05 | 1.00 | 0.47 | 46.31 | 843.81 | 0.00 | 0.00 |
SLC7A5 | Solute carrier family 7, member 5 | 8.97 | 7.28 | 13.09 | 8.81 | 17.71 | 14.76 | 2.70 | 75.00 |
SLC7A7 | Solute carrier family 7, member 7 | 57.12 | 46.60 | 136.68 | 198.99 | 16.97 | 16.00 | 71.00 | 25.00 |
SPR | Sepiapterin reductase | 10.20 | 3.55 | 13.08 | 8.26 | 10.08 | 9.95 | 21.00 | 1.80 |
Expression levels are represented as TPM, and are mean values for each condition from multiple animals. Sheep, n = 6; goat, n = 3; buffalo, n = 4; cattle, n = 4; horse, n = 3; pig, n = 3; rat, n = 3; human, n = 3. Human data were generated by CAGE-seq, as previously described (10), and all other data were generated by RNA-seq as described.