Table 3.
Average test data results obtained in the BRCA RNA-Seq dataset for the baseline (standard LASSO with homogeneous priors) and BLASSO with the two proposed approaches. The Area Under the Curve (AUC), average number of selected genes (#genes), robustness index (RI), computation time (mins.) and significance p-value are shown
| Model | AUC | #Genes | RI | Time | p-value |
|---|---|---|---|---|---|
| Lasso | 0.65 [0.63, 0.68] | 283.84±28.73 | 0.09±0.03 | 21.6 | - |
| Gene-specific | 0.7 [0.66, 0.71] | 238.73±19.31 | 0.15±0.03 | 2341.83 | <2.2×10−16 |
| Gene-disease | 0.69 [0.66, 0.71] | 226.59±20.01 | 0.1±0.04 | 2784.32 | <2.2×10−16 |