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Up- and downregulated DEGs in each diet comparison before and after setting the log2FC cut-off
| D2-D1 | D3-D1 | D4-D1 | ||||
|---|---|---|---|---|---|---|
| All | Cut-off | All | Cut-off | All | Cut-off | |
| Upregulated | 6 | 6 | 13 | 13 | 91 | 73 |
| Downregulated | 469 | 151 | 291 | 63 | 23 | 20 |
| All | 475 | 157 | 304 | 76 | 114 | 93 |
The total number of DEGs (893 before and 326 after cut-off application) considers common genes among comparisons
