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. 2018 Nov 20;19:827. doi: 10.1186/s12864-018-5225-5

Table 3.

Identified putative AMP sequences with no significant identity to the known proteins, less than 80% identity to known AMP sequences or 100% identity to proteins stored at NCBI database with < 70% query cover and their physico-chemical characteristics

# Sequence Species Charge Ha
No identity to proteins stored at NCBI nr database
1 FLGALGNALSRVLGK R. temporaria +3 0.813
2 FIGALVNALTRVLGK R. temporaria +3 1.213
3 FIGALVHALTGILGK R. temporaria + 2 2.247
4 LVPFIGRTLGGLLARFGK R. temporaria + 4 1.500
5 VPQLCFKFQKVIYCEINRTLPNEA R. dalmatina + 2 −0.625
6 FSQLFFAWLLRLCRQ P. kl. esculentus +3 2.587
7 GIVEAWPLR P. ridibundus, R. dalmatina + 1 1.133
8 NNLRHIVAWCKNRNYSLAVCARFKPQ R. temporaria + 6 −1.612
9 NLLGFLQGAKDILKECEADNYQGWLCESYKPQ R. dalmatina −1 −1.250
10 FLPLVLGKTHSEQAEILSWKSSNVEYHLPKCTTDV P. ridibundus, R. dalmatina 0 −0.763
11 FLPLIAGLWVNCSANNPKMLKLWK P. kl. esculentus + 4 1.363
12 FLPICDKSALRFVGKV P. ridibundus +3 0.494
13 EMPMKKKEETIQKKGMLKWKTIFTSHCWSFE P. ridibundus + 4 −1.835
14 RGLLDPITGLVGGLLR H. arborea + 2 1.213
< 80% identity to proteins stored at NCBI database
15 FLGFVGQALNALLGKLGK R. dalmatina +3 1.550
16 FLPAIAGILSQIFGK P. kl. esculentus + 2 2.540
17 FFPAFLKVAAKVVPSIICSITKNVET P. kl. esculentus +3 0.573
18 IVPILLGVVPQLVCAITKKC R. dalmatina, R. temporaria +3 1.675
19 IIPLLLGKVVCAITKKC R. dalmatina + 4 1.271
20 LVPMFLSKLICFITKKC R. temporaria + 4 1.918
21 GLEVLGKILSGILGK R. dalmatina, Rana arvalis + 2 1.220
22 LLGAALSALSSVIPSVISWFQKG Rana arvalis + 2 1.670
23 LANRAARNTSQNVLNAITCTL R. dalmatina +3 −1.662
24 ADFLDKLRNFAAKNLQNKASL P. ridibundus +3 −1.595
25 EMLRKKEETIQKKGMLKWKNDFYQSLLEF P. ridibundus +3 −1.779
100% identity to proteins stored at NCBI database with < 70% query cover
26 QKTYNRRPPGWSLYVFHQQISNLELEVI P. kl. esculentus + 2 −0.654
27 FVPLLVSKLVCVVTKNVRIWKLELEII Rana arvalis +3 1.663
28 FVPLLVSKLVCVVTKNVRTLET Rana arvalis +3 0.455
29 FLPIVTNLLLRFVG R. dalmatina + 2 3.729

aCalculated using the CCS consensus hydrophobicity scale [50]