TABLE 2.
Characteristics of the phylogenomic network of 2,616 prokaryote genomes based on complete genomes without rRNA genes
Threshold | No. of nonsingleton nodes, c | Density, D | Size of the maximal clique, z | No. of cliques, n |
---|---|---|---|---|
0 | 2,615 | 0.490 | 1,226 | Not available |
1 | 2,597 | 0.219 | 548 | Not available |
2 | 2,555 | 0.072 | 367 | 164,221 |
3 | 2,394 | 0.026 | 220 | 5,379 |
4 | 2,182 | 0.012 | 159 | 5,139 |
5 | 1,959 | 0.006 | 117 | 631 |
6 | 1,761 | 0.004 | 74 | 299 |
7 | 1,591 | 0.003 | 62 | 120 |
8 | 1,460 | 0.003 | 59 | 117 |
9 | 1,290 | 0.002 | 47 | 131 |