Table 1.

The bioinformatics tools adopted for the prediction of secreted proteins from S. lycopersici

Prediction algorithms	Objects predicted	References
SignalP v4.1	Signal peptides	http://www.cbs.dtu.dk/services/SignalP/
TMHMM v2.0	Transmembrane domains	http://www.cbs.dtu.dk/services/TMHMM/
big-PI Fungal Predictor	GPI-anchor site	http://mendel.imp.ac.at/gpi/fungi_server.html
ProtComp v9.0	sub-cellular localization	http://www.softberry.com/
TargetP v1.1	localization	http://www.cbs.dtu.dk/services/TargetP/