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. 2018 Nov 21;13(11):e0207029. doi: 10.1371/journal.pone.0207029

Table 1. Summary of RNA sequences with SHAPE profiles included in database.

RNA Length Reference
Pre-Q1 riboswitch, B. subtilis 34 [56]
Fluoride riboswitch, P. syringae 66 [56]
Adenine riboswitch, V. vulnificus 71 [56]
tRNA(asp), yeast 75 [18]
tRNA(phe), E. coli 76 [56]
TPP riboswitch, E. coli 79 [56]
cyclic-di-GMP riboswitch, V. cholerae 97 [56]
SAM I riboswitch, T. tengcongensis 118 [56]
5S rRNA, E. coli 120 [56]
M-Box riboswitch, B. subtilis 154 [56]
P546 domain, bI3 group I intron 155 [18]
Lysine riboswitch, T. martima 174 [56]
Group I intron, Azoarcus sp. 214 [56]
Hepatitis C virus IRES domain 336 [56]
Group II intron, O. iheyensis 412 [56]
Group I Intron, T. thermophila 425 [56]
5′ domain of 23S rRNA, E. coli 511 [56]
5′domain of 16S rRNA, E. coli 530 [56]
16S rRNA, H. volcanii 1474 [57]
16S rRNA, C. difficile 1503 [57]
16S rRNA, E. coli 1542 [18]
23S rRNA, E. coli 2904 [18]