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Summary of p-value discrepancies
| Non-significant (GCTA) | Significant (GCTA) | |
|---|---|---|
| Non-significant (Perm.) | 427,796 | 1667 |
| Significant (Perm.) | 81 | 1822 |
The p-values for heritability of 431,366 methylation sites, as calculated by either GCTA (using the parametric approach) or the permutation test, are shown. Sites are considered significant if their p–values are below a Bonferroni threshold of 10−7
