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GWAS of grain Cd accumulation using the 312 rice accessions. a, QQ-plot for GWAS of Cd concentration in grain. b, LD decay of the whole population. c, Manhattan plots of GWAS of grain Cd accumulation in 12 chromosomes. d, Colocalization of OsLCD with qCd-1. e, Co-localization of OsHMA3, OsNRAMP1 and OsNRAMP5 with qCd3–1 and qCd3–2
