Table 2.
Comparison of numbers of genes per CAZy family related to cellulose degradation. If an activity is only present in a single family then the values are in boldface. If the activity is present in multiple families, these are summed up in the ‘Total’ column and in boldface. LPMO = lytic polysaccharide mono-oxygenase, EGL = endoglucanase, XEG = xyloglucan-active endoglucanase, BGL = β-glucosidase, BXL = β-xylosidase, CBH = cellobiohydrolase.
Species/strain | LPMO |
EGL EGL/XEG |
BGL BGL/BXL |
CBH |
Total cellulose | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
AA9 | GH5 | GH7 | GH9 | GH45 | GH131 | GH12 | Total | GH1 | GH3 | GH3 | Total | GH6 | GH7 | Total | ||
A. luchuensis | 6 | 3 | 0 | 0 | 0 | 1 | 2 | 6 | 2 | 11 | 2 | 15 | 2 | 2 | 4 | 31 |
A. tubingensis | 6 | 3 | 0 | 0 | 0 | 1 | 2 | 6 | 2 | 10 | 2 | 14 | 2 | 2 | 4 | 30 |
A. niger ATCC1015 | 7 | 3 | 0 | 0 | 0 | 1 | 2 | 6 | 3 | 12 | 3 | 18 | 2 | 2 | 4 | 35 |
A. niger CBS 513.88 | 7 | 3 | 0 | 0 | 0 | 1 | 2 | 6 | 3 | 10 | 3 | 16 | 2 | 2 | 4 | 33 |
A. brasiliensis | 7 | 3 | 0 | 0 | 0 | 1 | 2 | 6 | 3 | 12 | 3 | 18 | 2 | 2 | 4 | 35 |
A. carbonarius | 3 | 3 | 0 | 0 | 0 | 0 | 1 | 4 | 3 | 8 | 2 | 13 | 2 | 2 | 4 | 24 |
A. aculeatus | 7 | 3 | 0 | 0 | 0 | 1 | 2 | 6 | 3 | 12 | 2 | 17 | 1 | 2 | 3 | 33 |
A. nidulans | 10 | 3 | 1 | 0 | 1 | 1 | 0 | 6 | 3 | 13 | 2 | 18 | 2 | 2 | 4 | 38 |
A. sydowii | 10 | 2 | 1 | 0 | 1 | 1 | 1 | 6 | 3 | 18 | 5 | 26 | 1 | 2 | 3 | 45 |
A. versicolor | 10 | 2 | 1 | 0 | 1 | 1 | 2 | 7 | 5 | 19 | 4 | 28 | 1 | 2 | 3 | 48 |
A. flavus | 7 | 3 | 1 | 0 | 1 | 3 | 3 | 11 | 3 | 15 | 4 | 22 | 1 | 2 | 3 | 43 |
A. oryzae | 8 | 3 | 1 | 0 | 0 | 1 | 3 | 8 | 3 | 15 | 4 | 22 | 1 | 2 | 3 | 41 |
A. terreus | 12 | 4 | 2 | 0 | 0 | 1 | 5 | 12 | 3 | 14 | 3 | 20 | 2 | 2 | 4 | 48 |
A. fumigatus | 7 | 4 | 2 | 0 | 1 | 2 | 3 | 12 | 5 | 11 | 1 | 17 | 1 | 2 | 3 | 39 |
A. fischeri | 8 | 5 | 2 | 0 | 1 | 2 | 4 | 14 | 5 | 12 | 3 | 20 | 2 | 3 | 5 | 47 |
A. clavatus | 7 | 3 | 2 | 0 | 0 | 1 | 2 | 8 | 3 | 6 | 1 | 8 | 2 | 2 | 4 | 27 |
A. wentii | 8 | 2 | 1 | 0 | 0 | 1 | 2 | 6 | 3 | 9 | 3 | 15 | 1 | 2 | 3 | 32 |