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. 2018 Nov 16;8:407. doi: 10.3389/fcimb.2018.00407

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Copyright © 2018 Monoyios, Hummel, Nöbauer, Patzl, Schlosser, Hess and Bilic.

This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.

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Number of unique and shared identifications for proteins detected as significantly upregulated in the virulent (A) and attenuated (B) cultivated H. meleagridis strain by the 2D-DIGE-α, 2D-DIGE-β, and SWATH MS experiments. Venny 2.1.0 tool (Oliveros, 2015) was used to summarize the findings with venn diagrams. The same extracted protein samples were analyzed by the 2D-DIGE-α and SWATH MS experiment. Based on the analyses the following identified proteins were found to be common between experiments: ♦ = actin, GAPDH and PEPCK (A); ▴ = Clan CD, family C13, asparaginyl endopeptidase-like CP (A); = GAPDH (B); ■ = Coronin (B). 2D-DIGE, two-dimensional differential gel electrophoresis; CP, cysteine peptidase; SWATH MS, sequential window acquisition of all theoretical mass spectra mass spectrometry; GAPDH, glyceraldehyde-3-phosphate dehydrogenase; PEPCK, phosphoenolpyruvate carboxykinase.