TABLE 2.
Characteristics of SNPs analyzed in the FADS1–FADS3 gene clusters in Indonesian infants1
| Gene | dbSNP build 108 | Position, bp | Major/minor alleles | MAF, % | HWE P value |
|---|---|---|---|---|---|
| FADS1 | rs174548 | 61,803,876 | C/G | 27 | 0.696 |
| rs174556 | 61,813,163 | A/G | 27 | 0.696 | |
| rs174561 | 61,815,236 | G/A | 27 | 0.696 | |
| Intergenic | rs3834458 | 61,827,449 | del/T | 22 | 0.456 |
| rs968567 | 61,828,092 | C/T | NA | NA | |
| FADS2 | rs174570 | 61,829,740 | T/C | 23 | 0.477 |
| rs174574 | 61,832,870 | A/C | 22 | 0.548 | |
| rs2727271 | 61,835,886 | A/T | 25 | 0.685 | |
| rs174576 | 61,836,038 | A/C | 22 | 0.368 | |
| rs174578 | 61,838,027 | A/T | 22 | 0.368 | |
| rs174579 | 61,838,141 | C/T | 28 | 1.000 | |
| rs174602 | 61,856,942 | C/T | 41 | 0.465 | |
| rs498793 | 61,857,233 | C/T | 15 | 0.421 | |
| rs526126 | 61,857,413 | C/G | 22 | 0.056 | |
| rs174575 | 61,834,531 | C/G | 30 | 1.000 | |
| Intergenic | rs174448 | 61,872,101 | T/C | 48 | 0.760 |
| rs174449 | 61,872,907 | C/T | 47 | 0.186 | |
| FADS3 | rs174455 | 61,888,645 | C/T | 45 | 0.474 |
1dbSNP, database single-nucleotide polymorphism; del., deleted; FADS, fatty acid desaturase; HWE, Hardy-Weinberg equilibrium; MAF, minor allele frequency; NA, not available.