Table 2.
Molecular marker | Marker | Primer name | Primer sequence 5’-3’ | Reference | Method of analysis | |
---|---|---|---|---|---|---|
Nuclear markers | ITS1 | GlossinaITS1_for | GTGATCCACCGCTTAGAGTGA | (Dyer et al., 2008) [16] | Gel electrophoresis | |
GlossinaITS1_rev | GCAAAAGTTGACCGAACTTGA | |||||
Microsatellite markers | A10 | A10 F | GCAACGCCAAGTGAAATAAAG | |||
A10 R | TACTGGGCTCGCGTACATAAT | |||||
Gmm14 | Gmm14 F | CACACCCTGGATTACAAA | (Baker & Krafsur, 2001) [19] | |||
Gmm14 R | TGAAATGCAACCCTTCTT | |||||
Mitochondrial markers | COI | COI | TTGATTTTTTGGTCATCCAGAAGT | (Dyer et al., 2008) [16] | Sequencing | |
CULR | TGAAGCTTAAATTCATTGCACTAATC | |||||
16S rRNA | NI-J-12585 | GGTCCCTTACGAATTTGAATATATCCT | ||||
LR-N-12866 | ACATGATCTGAGTTCAAACCGG | |||||
12S rRNA | 12SCFR | GAGAGTGACGGGCGATATGT | (Doudoumis et al., 2012) [52] | |||
12SCRR | AAACCAGGATTAGATACCCTATTAT | |||||
Symbiotic markers | Wolbachia | 16S rRNA | WspecF | YATACCTATTCGAAGGGATAG | Gel electrophoresis | |
WspecR | AGCTTCGAGTGAAACCAATTC |