Table 1.
Genes | Primers | Sequences | References |
---|---|---|---|
16S rRNA | LPW55 | AGTTTGATCCTGGCTCAG | [19] |
LPW56 | AGGCCCGGGAACGTATTCAC | ||
gyrA | gyrA-F | CCGCCGCGTACTGTTCT | [21] |
gyrA-R | CCATTTGCTAAAAGTGC | ||
gyrB | gyrB-F | GGAAAATCCTGCAGATGC | [21] |
gyrB-R | AAGCAACGTACGGATGTG | ||
parC | parC-F | TGGTTTAAAACCCGTTCA | [21] |
parC-R | AGCAGGTAAATATTGTGG | ||
parE | parE-F | GAACGCTTATCATCACGCCA | [21] |
parE-R | AGCATCCGCGAGAATACAGA | ||
qnrA | QnrA-F | AGAGGATTTCTCACGCCAGG | [22] |
QnrA-R | TGCCAGGCACAGATCTTGAC | ||
qnrB | QnrB-F | GGMATHGAAATTCGCCACTG | [22] |
QnrB-R | TTTGCYGYYCGCCAGTCGAA | ||
qnrS | QnrS-F | GCAAGTTCATTGAACAGGGT | [22] |
QnrS-R | TCTAAACCGTCGAGTTCGGCG | ||
Aac(6′)-Ib-cr | aac (6′)-Ib-cr-F | TTGCGATGCTCTATGAGTGGCTA | [22] |
aac (6′)-Ib-cr-R | CTCGAATGCCTGGCGTGTTT | ||
qepA | qepA-F | AACTGCTTGAGCCCGTAGAT | [22] |
qepA-R | GTCTACGCCATGGACCTCAC | ||
oqxA | oqxA-F | AGTCCATACCAACCTCGTCTCC | [22] |
oqxA-R | GCGTGGCTTTGAACTCTGC | ||
oqxB | oqxB-F | CCACCCTTAACTGATCCCTAA | [22] |
oqxB-R | CGCCAGCTCATCCTTCAC | ||
adk | adk-F | GGTGCACCGGGTGCAGGTAA | [23] |
adk-R | CCTAAGATTTTATCTAACTC | ||
atpG | atpG-F | ATGGCAGGTGCAAAAGAGAT | [23] |
atpG-R | TTGTACAACAGGCTTTTGCG | ||
frdB | frdB-F | CTTATCGTTGGTCTTGCCGT | [23] |
frdB-R | TTGGCACTTTCCACTTTTCC | ||
fucK | fucK-F | ACCACTTTCGGCGTGGATGG | [23] |
fucK-R | AAGATTTCCCAGGTGCCAGA | ||
mdh | mdh-F | TCATTGTATGATATTGCCCC | [23] |
mdh-R | ACTTCTGTACCTGCATTTTG | ||
pgi | pgi-F | GGTGAAAAAATCAATCGTAC | [23] |
pgi-R | ATTGAAAGACCAATAGCTGA | ||
recA | recA-F | ATGGCAACTCAAGAAGAAAA | [23] |
recA-R | TTACCAAACATCACGCCTAT |