Table 6.
Predications of non-synonymous SNPs function by SIFT software.
| nsSNPs | Positions | Reference allele | Mutant allele | Amino acid changed | Predications | Score |
|---|---|---|---|---|---|---|
| SNP1 | 597 | C | T | R597E | Affect protein function | 0.000 |
| SNP2 | 591 | G | C | T595I | Affect protein function | 0.000 |
| SNP3 | 572 | T | C | G572S | Affect protein function | 0.000 |
Amino acid substitutions changed in Tibetan goat protein sequences may have been predicted to modify the function of DSG3 gene (low certainty). The cutoff value in the SIFT program is a tolerance score of ≥ 0.05. The higher the tolerance score, the less functional impact a particular amino acid substitution is expected to have.