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. 2018 Nov 15;19(1):foy120. doi: 10.1093/femsyr/foy120

Table 1.

List of oligonucleotides.

name Nucleotide relative to +1 of 35S pre-rRNA 5΄ or 3΄ of pre-rRNA Genomic location Primer sequence 5΄ to 3΄
5΄5S −1249– −1269 NTS2 GGT AGA TAT GGC CGC AAC C
3΄NTS2 −956– −975 NTS2 CTT CAT AAC CTG TCA CCT TG
-200 −242– −266 promoter GTG AGG AAC TGG GTT ACC CGG
-24 −24– −47 promoter CTC ACA CTT GTA CTC CAT GAC
3΄ start 1–24 5΄ETS GT CTT CAA CAA CTG CTT TCG CAT
5΄ start 1–24 5΄ETS ATG CGA AAG CAG TTG AAG
+107/5’end 107–125 5΄ETS CTG ACG ATC ACC TAG CGA C
+120 120–138 5΄ETS AGA CTA GGC AGA TCT GAC
+177 177–194 5΄ETS AAT ACG ATC AAC CCA TG
+300 349–369 5΄ETS GAA TAG CCG GTC GCA AGA CTG
oligo x 611–632 5΄ETS ACC TAT TCC CTC TTG CTA GAA G
oligo z 688–704 5΄ETS GAT AAC TAT CTT AAA AG
+923 924–953 18S CAA TGT CTT CGG ACT CTT TG
5΄ITS 2656–2675 ITS1 ACGGTGAGAGATTTCTGTGC
3΄ITS 22826–2844 ITS2 CAAGAATTTTCGTAACTGG
5.8S 2886–2906 5.8S GTT CTT CAT CGA TGC GAG AAC
5΄25S 5276–5296 25S GAC TAC TTG CGT GCC TTG TTG
oligo y 56511–5627 25S CCG TTC CCT TGG CTG TG
3΄HIS4 415–434 HIS4 GTA CGT ACT TCA CCA AGC AC
U3 U3 snoRNA GATCCTATGAAGTACGTCGAC