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. 2018 Sep 26;16(6):7035–7047. doi: 10.3892/ol.2018.9509

Table IV.

The bacteria species of the class Bacilli forming clusters in volunteers and patients with L-SIL or H-SIL histopathological diagnosis. Gr.- cluster number, Dist.- Euclidean distance.

Control L-SIL H-SIL



Bacteria species Dist. Gr. Bacteria species Dist. Gr. Bacteria species Dist. Gr.
Lactobacillus crispatus 633,17 1 Lactobacillus iners 0,00 1 Lactobacillus iners 0,00 1
Lactobacillus iners 633,17 1 Lactobacillus acidophilus 0,00 1 Lactobacillus acidophilus 0,00 1
Lactobacillus taiwanensis 0,00 1 Actinobacillus parahaemolyticus 8,19 2 Lactobacillus crispatus 0,00 1
Actinobacillus parahaemolyticus 1,43 2 Actinobacillus porcinus 8,17 2 Actinobacillus parahaemolyticus 3,84 2
Actinobacillus porcinus 1,35 2 Actinobacillus rossii 8,17 2 Actinobacillus porcinus 3,88 2
Actinobacillus rossii 1,43 2 Alkalibacillus haloalkaliphilus 8,07 2 Actinobacillus rossii 3,88 2
Alkalibacillus haloalkaliphilus 1,19 2 Alkalibacillus salilacus 7,30 2 Alkalibacillus haloalkaliphilus 3,86 2
Alkalibacillus salilacus 0,47 2 Bacillus alcaliinulinus 8,06 2 Alkalibacillus salilacus 3,01 2
Bacillus alcaliinulinus 1,11 2 Bacillus anthracis 8,19 2 Bacillus alcaliinulinus 3,88 2
Bacillus anthracis 1,43 2 Bacillus arbutinivorans 8,20 2 Bacillus anthracis 3,88 2
Bacillus arbutinivorans 1,43 2 Bacillus aryabhattai 8,19 2 Bacillus arbutinivorans 3,80 2
Bacillus aryabhattai 1,35 2 Bacillus axarquiensis 8,20 2 Bacillus aryabhattai 3,78 2
Bacillus axarquiensis 1,35 2 Bacillus azotoformans 8,16 2 Bacillus axarquiensis 3,88 2
Bacillus azotoformans 1,43 2 Bacillus benzoevorans 8,14 2 Bacillus azotoformans 3,88 2
Bacillus benzoevorans 1,43 2 Bacillus cereus 8,15 2 Bacillus benzoevorans 3,88 2
Bacillus cereus 1,433 2 Bacillus flexus 8,18 2 Bacillus cereus 3,84 2
Bacillus flexus 1,43 2 Bacillus foraminis 8,20 2 Bacillus flexus 3,88 2
Bacillus foraminis 1,43 2 Bacillus fordii 8,19 2 Bacillus foraminis 3,86 2
Bacillus fordii 1,43 2 Bacillus fortis 8,19 2 Bacillus fordii 3,88 2
Bacillus fortis 1,43 2 Bacillus ginsenggisoli 8,16 2 Bacillus fortis 3,88 2
Bacillus ginsenggisoli 1,35 2 Bacillus hackensackii 8,20 2 Bacillus ginsenggisoli 3,88 2
Bacillus hackensackii 1,43 2 Bacillus herbersteinensis 8,19 2 Bacillus hackensackii 3,86 2
Bacillus herbersteinensis 1,35 2 Bacillus horneckiae 8,07 2 Bacillus herbersteinensis 3,88 2
Bacillus horneckiae 1,43 2 Bacillus isabeliae 8,13 2 Bacillus horneckiae 3,86 2
Bacillus isabeliae 1,43 2 Bacillus koreensis 8,19 2 Bacillus isabeliae 3,88 2
Bacillus koreensis 1,43 2 Bacillus litoralis 8,17 2 Bacillus koreensis 3,88 2
Bacillus litoralis 1,43 2 Bacillus mucilaginosus 8,17 2 Bacillus litoralis 3,88 2
Bacillus mucilaginosus 1,27 2 Bacillus oleronius 8,17 2 Bacillus mucilaginosus 3,78 2
Bacillus oleronius 1,43 2 Bacillus olivae 8,20 2 Bacillus oleronius 3,88 2
Bacillus olivae 1,27 2 Bacillus oryzae 8,15 2 Bacillus olivae 3,86 2
Bacillus oryzae 1,43 2 Bacillus pseudomegaterium 8,19 2 Bacillus oryzae 3,88 2
Bacillus pseudomegaterium 1,35 2 Bacillus sonorensis 8,15 2 Bacillus pseudomegaterium 3,86 2
Bacillus sonorensis 0,79 2 Bacillus thermoamylovorans 8,20 2 Bacillus sonorensis 3,88 2
Bacillus thermoamylovorans 1,43 2 Brevibacillus brevis 8,20 2 Bacillus thermoamylovorans 3,84 2
Brevibacillus brevis 1,35 2 Brevibacillus centrosporus 8,14 2 Brevibacillus brevis 3,80 2
Brevibacillus centrosporus 1,43 2 Brevibacillus choshinensis 8,02 2 Brevibacillus centrosporus 3,86 2
Brevibacillus choshinensis 1,43 2 Brevibacillus formosus 7,81 2 Brevibacillus choshinensis 3,78 2
Brevibacillus formosus 1,27 2 Brevibacillus ginsengisoli 7,78 2 Brevibacillus formosus 3,50 2
Brevibacillus ginsengisoli 0,95 2 Brevibacillus invocatus 8,18 2 Brevibacillus ginsengisoli 3,67 2
Brevibacillus invocatus 1,43 2 Brevibacillus limnophilus 8,12 2 Brevibacillus invocatus 3,86 2
Brevibacillus limnophilus 1,35 2 Brevibacillus panacihumi 8,07 2 Brevibacillus limnophilus 3,78 2
Brevibacillus panacihumi 0,71 2 Brevibacillus reuszeri 8,17 2 Brevibacillus panacihumi 3,68 2
Brevibacillus reuszeri 1,43 2 Geobacillus thermoglucosidans 8,18 2 Brevibacillus reuszeri 3,88 2
Geobacillus thermoglucosidans 1,35 2 Lactobacillus acidifarinae 8,17 2 Geobacillus thermoglucosidans 3,56 2
Lactobacillus acidifarinae 1,43 2 Lactobacillus amylolyticus 8,20 2 Lactobacillus acidifarinae 3,88 2
Lactobacillus acidophilus 19,47 2 Lactobacillus antri 19,75 2 Lactobacillus amylolyticus 3,86 2
Lactobacillus amylolyticus 1,35 2 Lactobacillus apis 7,11 2 Lactobacillus antri 3,54 2
Lactobacillus antri 1,43 2 Lactobacillus brantae 8,17 2 Lactobacillus apis 2,78 2
Lactobacillus apis 118,51 2 Lactobacillus camelliae 8,12 2 Lactobacillus brantae 3,69 2
Lactobacillus brantae 0,71 2 Lactobacillus casei 8,18 2 Lactobacillus camelliae 3,74 2
Lactobacillus camelliae 0,47 2 Lactobacillus coleohominis 8,20 2 Lactobacillus casei 3,88 2
Lactobacillus casei 1,43 2 Lactobacillus crispatus 721,14 2 Lactobacillus coleohominis 1,50 2
Lactobacillus coleohominis 1,43 2 Lactobacillus diolivorans 8,20 2 Lactobacillus diolivorans 3,86 2
Lactobacillus diolivorans 1,43 2 Lactobacillus equi 8,18 2 Lactobacillus equi 3,71 2
Lactobacillus equi 1,43 2 Lactobacillus equicursoris 8,13 2 Lactobacillus equicursoris 3,84 2
Lactobacillus equicursoris 1,43 2 Lactobacillus fabifermentans 7,99 2 Lactobacillus fabifermentans 3,88 2
Lactobacillus fabifermentans 1,43 2 Lactobacillus faeni 7,06 2 Lactobacillus faeni 3,27 2
Lactobacillus faeni 0,23 2 Lactobacillus farraginis 8,20 2 Lactobacillus farraginis 3,86 2
Lactobacillus farraginis 1,43 2 Lactobacillus fermentum 8,17 2 Lactobacillus fermentum 3,49 2
Lactobacillus fermentum 1,35 2 Lactobacillus frumenti 5,83 2 Lactobacillus frumenti 3,80 2
Lactobacillus frumenti 1,43 2 Lactobacillus gallinarum 22,36 2 Lactobacillus gallinarum 16,20 2
Lactobacillus gallinarum 2,23 2 Lactobacillus gasseri 5,54 2 Lactobacillus gasseri 3,57 2
Lactobacillus gasseri 1,43 2 Lactobacillus gastricus 8,20 2 Lactobacillus gastricus 3,88 2
Lactobacillus gastricus 1,35 2 Lactobacillus gigeriorum 6,92 2 Lactobacillus gigeriorum 2,30 2
Lactobacillus gigeriorum 0,55 2 Lactobacillus guizhouensis 8,20 2 Lactobacillus guizhouensis 3,88 2
Lactobacillus guizhouensis 1,27 2 Lactobacillus hamsteri 7,78 2 Lactobacillus hamsteri 3,72 2
Lactobacillus hamsteri 0,07 2 Lactobacillus helveticus 12,5 2 Lactobacillus helveticus 8,65 2
Lactobacillus helveticus 2,38 2 Lactobacillus hilgardii 8,20 2 Lactobacillus hilgardii 3,70 2
Lactobacillus hilgardii 1,43 2 Lactobacillus ingluviei 8,06 2 Lactobacillus ingluviei 3,88 2
Lactobacillus ingluviei 1,43 2 Lactobacillus intermedius 22,70 2 Lactobacillus intermedius 1,78 2
Lactobacillus intermedius 7,40 2 Lactobacillus intestinalis 8,02 2 Lactobacillus intestinalis 3,73 2
Lactobacillus intestinalis 1,27 2 Lactobacillus japonicus 6,42 2 Lactobacillus japonicus 3,82 2
Lactobacillus japonicus 1,59 2 Lactobacillus jensenii 268,38 2 Lactobacillus jensenii 39,95 2
Lactobacillus jensenii 1,43 2 Lactobacillus johnsonii 113,22 2 Lactobacillus johnsonii 10,03 2
Lactobacillus johnsonii 0,87 2 Lactobacillus kalixensis 8,16 2 Lactobacillus kalixensis 3,88 2
Lactobacillus kalixensis 1,43 2 Lactobacillus kisonensis 8,20 2 Lactobacillus kisonensis 3,86 2
Lactobacillus kisonensis 1,43 2 Lactobacillus kitasatonis 5,94 2 Lactobacillus kitasatonis 0,56 2
Lactobacillus kitasatonis 0,00 2 Lactobacillus letivazi 7,74 2 Lactobacillus letivazi 3,65 2
Lactobacillus letivazi 1,11 2 Lactobacillus manihotivorans 8,20 2 Lactobacillus manihotivorans 3,84 2
Lactobacillus manihotivorans 1,43 2 Lactobacillus mucosae 8,19 2 Lactobacillus mucosae 3,81 2
Lactobacillus mucosae 1,43 2 Lactobacillus oris 6,08 2 Lactobacillus oris 3,73 2
Lactobacillus oris 1,43 2 Lactobacillus paracasei 8,19 2 Lactobacillus paracasei 3,88 2
Lactobacillus paracasei 1,35 2 Lactobacillus parafarraginis 8,20 2 Lactobacillus parafarraginis 3,86 2
Lactobacillus parafarraginis 1,43 2 Lactobacillus parakefiri 8,19 2 Lactobacillus parakefiri 3,76 2
Lactobacillus parakefiri 1,43 2 Lactobacillus paraplantarum 7,97 2 Lactobacillus paraplantarum 3,88 2
Lactobacillus paraplantarum 1,43 2 Lactobacillus pentosus 8,89 2 Lactobacillus pentosus 3,66 2
Lactobacillus pentosus 1,03 2 Lactobacillus plantarum 7,78 2 Lactobacillus plantarum 3,69 2
Lactobacillus plantarum 1,03 2 Lactobacillus reuteri 7,26 2 Lactobacillus reuteri 3,88 2
Lactobacillus reuteri 1,43 2 Lactobacillus rhamnosus 8,04 2 Lactobacillus rhamnosus 3,63 2
Lactobacillus rhamnosus 0,00 2 Lactobacillus ruminis 8,20 2 Lactobacillus ruminis 3,86 2
Lactobacillus ruminis 1,43 2 Lactobacillus salivarius 8,20 2 Lactobacillus salivarius 3,77 2
Lactobacillus salivarius 1,43 2 Lactobacillus senmaizukei 7,43 2 Lactobacillus senmaizukei 3,27 2
Lactobacillus senmaizukei 0,79 2 Lactobacillus siliginis 8,11 2 Lactobacillus siliginis 3,86 2
Lactobacillus siliginis 1,35 2 Lactobacillus similis 8,20 2 Lactobacillus similis 3,76 2
Lactobacillus similis 1,43 2 Lactobacillus suebicus 8,18 2 Lactobacillus suebicus 3,84 2
Lactobacillus suebicus 1,43 2 Lactobacillus taiwanensis 477,97 2 Lactobacillus taiwanensis 156,77 2
Lactobacillus thailandensis 1,35 2 Lactobacillus thailandensis 8,15 2 Lactobacillus thailandensis 3,80 2
Lactobacillus tucceti 0,87 2 Lactobacillus tucceti 7,80 2 Lactobacillus tucceti 3,30 2
Lactobacillus ultunensis 48,75 2 Lactobacillus ultunensis 48,09 2 Lactobacillus ultunensis 45,05 2
Lactobacillus vaginalis 1,43 2 Lactobacillus vaginalis 6,75 2 Lactobacillus vaginalis 3,73 2
Lactobacillus versmoldensis 1,35 2 Lactobacillus versmoldensis 8,18 2 Lactobacillus versmoldensis 3,88 2
Lactobacillus zeae 0,79 2 Lactobacillus zeae 8,20 2 Lactobacillus zeae 3,86 2
Lentibacillus kapialis 0,47 2 Lentibacillus kapialis 7,82 2 Lentibacillus kapialis 3,48 2
Lentibacillus salinarum 1,43 2 Lentibacillus salinarum 8,15 2 Lentibacillus salinarum 3,81 2
Lysinibacillus boronitolerans 1,43 2 Lysinibacillus boronitolerans 8,17 2 Lysinibacillus boronitolerans 3,88 2
Lysinibacillus cresolivorans 0,87 2 Lysinibacillus cresolivorans 8,12 2 Lysinibacillus cresolivorans 3,66 2
Lysinibacillus fusiformis 1,35 2 Lysinibacillus fusiformis 8,20 2 Lysinibacillus fusiformis 3,88 2
Lysinibacillus parviboronicapiens 1,43 2 Lysinibacillus parviboronicapiens 8,12 2 Lysinibacillus parviboronicapiens 3,78 2
Lysinibacillus xylanilyticus 1,19 2 Lysinibacillus xylanilyticus 8,19 2 Lysinibacillus xylanilyticus 3,68 2
Paenibacillus caespitis 1,43 2 Paenibacillus caespitis 8,20 2 Paenibacillus caespitis 3,84 2
Paenibacillus castaneae 1,43 2 Paenibacillus castaneae 8,21 2 Paenibacillus castaneae 3,84 2
Paenibacillus cellulosilyticus 1,43 2 Paenibacillus cellulosilyticus 8,17 2 Paenibacillus cellulosilyticus 3,88 2
Paenibacillus cellulositrophicus 1,35 2 Paenibacillus cellulositrophicus 8,185 2 Paenibacillus cellulositrophicus 3,86 2
Paenibacillus cookii 1,43 2 Paenibacillus cookii 8,17 2 Paenibacillus cookii 3,88 2
Paenibacillus ehimensis 1,35 2 Paenibacillus ehimensis 8,16 2 Paenibacillus ehimensis 3,86 2
Paenibacillus elgii 1,43 2 Paenibacillus elgii 8,20 2 Paenibacillus elgii 3,86 2
Paenibacillus filicis 1,35 2 Paenibacillus filicis 8,21 2 Paenibacillus filicis 3,88 2
Paenibacillus forsythiae 1,43 2 Paenibacillus forsythiae 8,21 2 Paenibacillus forsythiae 3,86 2
Paenibacillus gansuensis 1,43 2 Paenibacillus gansuensis 8,21 2 Paenibacillus gansuensis 3,86 2
Paenibacillus ginsengagri 1,43 2 Paenibacillus ginsengagri 8,17 2 Paenibacillus ginsengagri 3,81 2
Paenibacillus jamilae 1,43 2 Paenibacillus jamilae 8,21 2 Paenibacillus jamilae 3,80 2
Paenibacillus lactis 1,43 2 Paenibacillus lactis 8,21 2 Paenibacillus lactis 3,86 2
Paenibacillus macerans 1,43 2 Paenibacillus macerans 8,17 2 Paenibacillus macerans 3,88 2
Paenibacillus mendelii 1,43 2 Paenibacillus mendelii 8,21 2 Paenibacillus mendelii 3,86 2
Paenibacillus motobuensis 1,43 2 Paenibacillus motobuensis 8,14 2 Paenibacillus motobuensis 3,88 2
Paenibacillus naphthalenovorans 1,43 2 Paenibacillus naphthalenovorans 8,18 2 Paenibacillus naphthalenovorans 3,88 2
Paenibacillus ourofinensis 1,03 2 Paenibacillus ourofinensis 8,07 2 Paenibacillus ourofinensis 3,84 2
Paenibacillus panacisoli 1,43 2 Paenibacillus panacisoli 8,17 2 Paenibacillus panacisoli 3,81 2
Paenibacillus pini 1,35 2 Paenibacillus pini 8,20 2 Paenibacillus pini 3,88 2
Paenibacillus pocheonensis 1,43 2 Paenibacillus pocheonensis 8,20 2 Paenibacillus pocheonensis 3,86 2
Paenibacillus polymyxa 1,43 2 Paenibacillus polymyxa 8,20 2 Paenibacillus polymyxa 3,80 2
Paenibacillus residui 1,43 2 Paenibacillus residui 8,18 2 Paenibacillus residui 3,88 2
Paenibacillus vortex 1,43 2 Paenibacillus vortex 8,17 2 Paenibacillus vortex 3,88 2
Paenibacillus woosongensis 1,11 2 Paenibacillus woosongensis 8,07 2 Paenibacillus woosongensis 3,71 2
Paenibacillus xinjiangensis 1,43 2 Paenibacillus xinjiangensis 8,19 2 Paenibacillus xinjiangensis 3,80 2
Pontibacillus halophilus 1,27 2 Pontibacillus halophilus 8,02 2 Pontibacillus halophilus 3,68 2
Pontibacillus marinus 1,35 2 Pontibacillus marinus 8,19 2 Pontibacillus marinus 3,88 2
Streptococcus agalactiae 1,11 2 Streptococcus agalactiae 97,05 2 Streptococcus agalactiae 3,65 2
Streptococcus alactolyticus 1,43 2 Streptococcus alactolyticus 8,18 2 Streptococcus alactolyticus 3,88 2
Streptococcus anginosus 1,27 2 Streptococcus anginosus 10,85 2 Streptococcus anginosus 25,55 2
Streptococcus australis 1,43 2 Streptococcus australis 8,16 2 Streptococcus australis 3,88 2
Streptococcus bovis 1,27 2 Streptococcus bovis 7,46 2 Streptococcus bovis 3,84 2
Streptococcus cristatus 1,43 2 Streptococcus cristatus 8,17 2 Streptococcus cristatus 3,8186 2
Streptococcus fryi 1,35 2 Streptococcus fryi 8,07 2 Streptococcus fryi 3,80 2
Streptococcus gallinaceus 1,43 2 Streptococcus gallinaceus 8,20 2 Streptococcus gallinaceus 3,80 2
Streptococcus gordonii 1,43 2 Streptococcus gordonii 8,19 2 Streptococcus gordonii 3,88 2
Streptococcus infantis 1,43 2 Streptococcus infantis 7,96 2 Streptococcus infantis 3,80 2
Streptococcus intermedius 1,43 2 Streptococcus intermedius 8,15 2 Streptococcus intermedius 3,88 2
Streptococcus macedonicus 1,43 2 Streptococcus macedonicus 7,97 2 Streptococcus macedonicus 3,88 2
Streptococcus milleri 1,35 2 Streptococcus milleri 8,08 2 Streptococcus milleri 19,66 2
Streptococcus mutans 1,43 2 Streptococcus mutans 7,98 2 Streptococcus mutans 3,88 2
Streptococcus oligofermentans 1,43 2 Streptococcus oligofermentans 8,13 2 Streptococcus oligofermentans 3,88 2
Streptococcus oralis 1,43 2 Streptococcus oralis 8,09 2 Streptococcus oralis 3,80 2
Streptococcus orisratti 1,43 2 Streptococcus orisratti 10,78 2 Streptococcus orisratti 3,84 2
Streptococcus parasanguinis 1,43 2 Streptococcus parasanguinis 8,18 2 Streptococcus parasanguinis 3,88 2
Streptococcus pasteuri 1,43 2 Streptococcus pasteuri 8,18 2 Streptococcus pasteuri 3,88 2
Streptococcus pseudopneumoniae 1,27 2 Streptococcus pseudopneumoniae 7,73 2 Streptococcus pseudopneumoniae 3,88 2
Streptococcus sanguinis 1,43 2 Streptococcus sanguinis 8,19 2 Streptococcus sanguinis 3,86 2
Streptococcus thermophilus 1,35 2 Streptococcus thermophilus 8,20 2 Streptococcus thermophilus 3,88 2
Streptococcus tigurinus 1,35 2 Streptococcus tigurinus 7,82 2 Streptococcus tigurinus 3,78 2
Streptococcus vestibularis 1,27 2 Streptococcus vestibularis 8,03 2 Streptococcus vestibularis 3,47 2
Ureibacillus thermophilus 1,43 2 Ureibacillus thermophilus 8,19 2 Ureibacillus thermophilus 3,86 2
Virgibacillus byunsanensis 1,43 2 Virgibacillus byunsanensis 8,20 2 Virgibacillus byunsanensis 3,86 2
Virgibacillus salexigens 1,43 2 Virgibacillus salexigens 8,20 2 Virgibacillus salexigens 3,84 2
Viridibacillus arvi 0,87 2 Viridibacillus arvi 8,18 2 Viridibacillus arvi 3,67 2
Viridibacillus neidei 1,35 2 Viridibacillus neidei 8,18 2 Viridibacillus neidei 3,88 2