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. 2018 Nov 28;7:188. doi: 10.1038/s41426-018-0187-x

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© The Author(s) 2018

Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/.

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Fig. 5 — a Venn diagram depicting differentially expressed genes. A twofold difference cut off and false discovery rates (FDRs) less than 0.05 were used to define differentially expressed genes. b GO enrichment analysis of differentially expressed genes was conducted. Red or blue circles represent upregulated or downregulated genes in filamentous cells, respectively. The inner cycle bars represent statistical significance. c R package heatmap was used to depict selected differentially expressed genes. Functional categories of genes are indicated. Log₂(F/Y), Log₂ (read counts of filamentous cells/read counts of yeast cells)