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. Author manuscript; available in PMC: 2018 Nov 28.
Published in final edited form as: Cell Rep. 2018 Nov 13;25(7):1856–1871.e6. doi: 10.1016/j.celrep.2018.10.053
REAGENT or RESOURCE SOURCE IDENTIFIER
Bacterial and Virus Strains
Escherichia coli, OP50 Caenorhabditis Genetics Center WormBase ID: OP50
Escherichia coli, DH5α ThermoFisher Scientific Cat#8265017
Escherichia coli, DH5β NEB Cat#C30191
Chemicals, Peptides, and Recombinant Proteins
Aldicarb Sigma Cat#33386
Sytox green Sigma Cat#S7020
Latrunculin A Sigma Cat#L5163
Critical Commercial Assays
cDNA synthesis kit Roche Cat#04897030001
SYBR Premix Ex TaqII master mix Clontech Cat#RR820B
RNeasy Plus Mini Kit QIAGEN Cat#74136
Experimental Models: Organisms/Strains
N2 C.elegans wild isolate Caenorhabditis Genetics Center WormBase ID: N2
Mutant hic-1(ok3475) X Caenorhabditis Genetics Center Strain RB2512
Mutant nab-1(ok943) I Caenorhabditis Genetics Center Strain RB1017
Mutant acr-16(ok789) V Caenorhabditis Genetics Center Strain RB918
Mutant mig-14(mu71) II Caenorhabditis Genetics Center Strain CF367
Mutant lin-17(n671) I Caenorhabditis Genetics Center Strain MT1306
Integrated line Punc-17::RFP Josh Kaplan Lab (Babu et al., 2011) nuIs321
Integrated line Punc-25::GFP Caenorhabditis Genetics Center juIs76 CGC strain number CZ1200
Integrated line Punc-129::GFP::SNB-1 Josh Kaplan Lab (Sieburth et al., 2005) nuIs152
Integrated line Punc-25::SNB-1::GFP Josh Kaplan Lab (Hao et al., 2012) nuIs376
Integrated line Pacr-2::mCherry::RAB-3 Mike Francis Lab (Petrash et al., 2013) uIfs63 strain pPRB47
Integrated line Punc-129::SYD-2::YFP Josh Kaplan Lab (Sieburth et al., 2005) nuIs159
Integrated line Punc-25::SYD-2::GFP Caenorhabditis Genetics Center (Yeh et al., 2005) hpIs3 CGC strain number ZM54
Integrated line Pmyo-3::UNC-29::GFP Villu Maricq lab (Francis et al., 2005) akIs38
Integrated line Pmyo-3::ACR-16::GFP Josh Kaplan Lab (Babu et al., 2011) nuIs299
Integrated line Pmyo-3::UNC-49::GFP Josh Kaplan Lab (Babu et al., 2011) nuIs283
Integrated line Pmyo-3::GCaMP3.35 Caenorhabditis Genetics Center (Schwarz et al., 2012) goels3 CGC strain number HBR4
Integrated line Pnab-1::NAB-1::GFP Mei Zhen Lab (Hung et al., 2007) hpIs66
Integrated line Punc-17:: GFP-UtrCH This study indIs001
Integrated line Punc-129::LIN-44::mCherry This study, array number IndEx32 from (Pandey et al., 2017) indIs002
Integrated line Punc-17::CWN-2::mCherry This study indIs003
Integrated line Punc-17::NLP-21::YFP Derek Sieburth Lab (Staab et al., 2013) vjIs30
Integrated line Punc-129::GSLN-1::YFP Josh Kaplan Lab (Sieburth et al., 2005) nuIs169
Plasmid BAB#0101 Phic-1::mCherry (injected into WT) This study Array IndEx001/strain BAB047
Plasmid BAB#0102 Phic-1::HIC-1::mCherry (injected into WT) This study Array IndEx002/strain BAB348
Plasmid BAB#0103 Prab-3::HIC-1 (injected into hic-1) This study Array IndEx003/strain BAB349
Plasmid BAB#0104 Plet-413::HIC-1 (injected into hic-1) This study Array IndEx004/strain BAB350
Plasmid BAB#0105 Pmyo-3::HIC-1 (injected into hic-1) This study Array IndEx005/strain BAB351
Plasmid BAB#0106 Punc-17::HIC-1 (injected into hic-1) This study Array IndEx006/strain BAB352
Plasmid BAB#0107 Punc-25::HIC-1 (injected into hic-1) This study Array IndEx007/strain BAB353
Plasmid BAB#0108 Punc-17::HIC-1 ΔC(4aa) (injected into hic-1) This study Array IndEx008/strain BAB354
Plasmid BAB#0110 Punc-17::NAB-1::VN173 (injected into uIfs63) This study Array IndEx009/ strain BAB355
Plasmid BAB#0111 Punc-17::HIC-1::VC155 (injected into uIfs63) This study Array IndEx010/ strain BAB356
Plasmid BAB#0112 Punc-17::HIC-1ΔC(4aa)::VC155 (injected into uIfs63) This study Array IndEx011/ strain BAB357
Plasmid BAB#0115 Phic-1::HIC-1ΔC(4aa)::mCherry (injected into nuIs152) This study Array IndEx012/ strain BAB358
Plasmid BAB#0114 Punc-25:: GFP-UtrCH (injected into WT) This study Array IndEx013/ strain BAB359
Plasmid BAB#0110 Punc-17::NAB-1::VN173 (injected into nab-1) This study Array IndEx014/ strain BAB360
Plasmid BAB#0109 Punc-17::CWN-2::mCherry (injected into WT) This study Array IndEx015/ strain BAB361
Plasmid BAB#0110, BAB#0111 Punc-17::HIC-1:: VC155;Punc17::NAB-1::VN173 (injected into uIfs63) This study Array IndEx016/ strain BAB362
Plasmid BAB#0110, BAB#0112 Punc-17::HIC-1ΔC(4aa):: VC155; Punc17::NAB-1::VN173 (injected into uIfs63) This study Array IndEx017/ strain BAB363
Plasmid BAB#0116 Punc-17:: HIC-1(ΔC(4aa)+NAB-1 (ABD)) (injected into BAB323) This study Array IndEx018/ strain BAB364
Plasmid BAB#0116 Punc-17:: HIC-1(ΔC(4aa)+NAB-1 (ABD)) (injected into BAB330) This study Array IndEx019/ strain BAB365
Plasmid BAB#0116 Punc-17:: HIC-1(ΔC(4aa)+NAB-1 (ABD)) (injected into BAB333) This study Array IndEx020/ strain BAB366
Plasmid BAB#0108 Punc-17::HIC-1 ΔC(4aa) (injected into BAB323) This study Array IndEx021/ strain BAB367
Plasmid BAB#0108 Punc-17::HIC-1ΔC(4aa) (injected into BAB330) This study Array IndEx022/ strain BAB368
Plasmid BAB#0108 Punc-17::HIC-1 ΔC(4aa) (injected into BAB333) This study Array IndEx023/ strain BAB369
Plasmid pCFJ68 Punc-122::GFP (injected into indIs003) This study Array IndEx024/ strain BAB370
Plasmid pCFJ68 Punc-122::GFP (injected into indIs002) This study Array IndEx025/ strain BAB371
hic-1(ok3475); nuIs321 This study BAB302
hic-1(ok3475); juIs76 This study BAB303
hic-1(ok3475); nuIs152 This study BAB304
hic-1(ok3475); juIs376 This study BAB305
hic-1(ok3475); uIfs63 This study BAB306
hic-1(ok3475); nuIs159 This study BAB307
hic-1(ok3475); hpIs3 This paper BAB308
hic-1(ok3475); nuIs169 This paper BAB309
hic-1(ok3475); nuIs169; IndEx006 This study BAB310
hic-1(ok3475); akIs38 This study BAB311
hic-1(ok3475); nuIs299 This study BAB312
hic-1(ok3475); nuIs299; IndEx006 This study BAB313
hic-1(ok3475); nuIs283 This study BAB314
hic-1(ok3475); goels3 This study BAB315
hic-1(ok3475); goels3; IndEx006 This study BAB316
hic-1(ok3475); indIs001 This study BAB317
hic-1(ok3475); indIs001; IndEx006 This study BAB318
hic-1(ok3475); indIs002 This study BAB319
hic-1(ok3475); indIs002; IndEx006 This study BAB320
hic-1(ok3475); IndIs003 This study BAB321
hic-1(ok3475); IndIs003; IndEx006 This study BAB322
nab-1(ok943); hic-1(ok3475) This study BAB323
mig-14(mu71); hic-1(ok3475) This study BAB324
lin-17(sy277); hic-1(ok3475) This study BAB325
nab-1(ok943); IndEx014 This study BAB326
nab-1(ok943); hpIs66 This study BAB327
nab-1(ok943); IndIs001 This study BAB328
nab-1(ok943); IndEx014; IndIs001 This study BAB329
nab-1(ok943); hic-1(ok3475); IndIs001 This study BAB330
nab-1(ok943); IndIs003 This study BAB331
nab-1(ok943); IndEx014; IndIs003 This study BAB332
nab-1(ok943); hic-1(ok3475); IndIs003 This study BAB333
mig-14(mu71); IndIs003 This study BAB334
mig-14(mu71); hic-1(ok3475); IndIs003 This study BAB335
hic-1(ok3475); hpIs66 This study BAB336
hpIs66; IndEx002 This study BAB337
hic-1(ok3475); vjIs30 This study BAB348
nab-1(ok943); nuIs299 This study BAB349
nab-1(ok943); nuIs299; IndEx014 This study BAB350
nab-1(ok943); hic-1(ok3475); nuIs299 This study BAB351
hic-1(ok3475); acr-16(ok789) This study BAB352
hic-1(ok3475); hpIs66; IndEx006 This study BAB355
hic-1(ok3475); IndEx024 This study BAB356
hic-1(ok3475); IndEx006; IndEx024 This study BAB357
mig-14(mu71); IndEx024 This study BAB358
mig-14(mu71); hic-1(ok3475); IndEx024 This study BAB359
hic-1(ok3475); IndEx025 This study BAB360
hic-1(ok3475); IndEx006; IndEx025 This study BAB361
Oligonucleotides
See Table S1 for primer sequences and information N/A
Recombinant DNA
pPD49.26 Addgene Plasmid#1686 (Andrew Fire lab)
pCFJ910 Addgene Plasmid#44481 (Erik Jorgensen lab)
pCFJ68 (Exp5605_Punc-122::GFP::unc-54utr) Addgene Plasmid#19325 (Erik Jorgensen lab)
pCFJ90 (Pmyo-2::mCherry::unc-54utr) Addgene Plasmid#19327 (Erik Jorgensen lab)
pCFJ104 (Pmyo-3::mCherrry:::unc-54) Addgene Plasmid#19328 (Erik Jorgensen lab)
GFP-UtrCH (reporter for F-actin) Addgene Plasmid#26737 (William Bement lab)
Phic-1::mCherry This study pBAB# 0101
Phic-1::HIC-1::mCherry This study pBAB# 0102
Prab-3::HIC-1 This study pBAB# 0103
Plet-413::HIC-1 This study pBAB# 0104
Pmyo-3::HIC-1 This study pBAB# 0105
Punc-17::HIC-1 This study pBAB# 0106
Punc-25::HIC-1 This study pBAB# 0107
Punc-17::HIC-1ΔC(4aa) This study pBAB# 0108
Punc-17::CWN-2::mCherry This study pBAB# 0109
Punc-17::NAB-1::Linker::VN173 This study pBAB# 0110
Punc-17::HIC-1::Linker::VC155 This study pBAB# 0111
Punc-17:: HIC-1ΔC(4aa)::Linker::VC155 This study pBAB# 0112
Punc-17:: GFP-UtrCH This study pBAB# 0113
Punc-25:: GFP-UtrCH This study pBAB# 0114
Phic-1 ::HIC-1ΔC(4aa)::mCherry This study pBAB# 0115
Punc-17:: HIC-1(ΔC(4aa)+NAB-1(ABD)) This study pBAB# 0116
Software and Algorithms
ImageJ n/a https://imagej.nih.gov/ij/
Prism7 Graphpad Prism https://www.graphpad.com/
ApE n/a http://jorgensen.biology.utah.edu/wayned/ape/
Snapgene Snapgene http://www.snapgene.com/
Mind the graph Mind the GRAPH https://mindthegraph.com