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. 2018 Nov 26;14(11):e1006550. doi: 10.1371/journal.pcbi.1006550

Table 3. Summary connectivity statistics, correlation with relative projection frequency, classification performance logistic regression, and correlation with area degree.

Connectivity statistics
(Fig 4)
Relative connection frequency
(Fig 5)
Logistic regression performance
(Fig 6)
Degree
(Fig 7)
distance |density difference| distance |density difference| distance & |density difference|
growth layouts correlation relative connection frequency vs distance validation p-values of correlation: sign test correlation relative connection frequency vs |density difference| validation p-values of correlation: sign test correlation area degree vs neuron density validation p-values of correlation: sign test
set growth mode # origins median fraction connected areas median number of connections median ρ median p-value z-value p-value median ρ median p-value z-value p-value median McFadden’s Pseudo R2 median McFadden’s Pseudo R2 median McFadden’s Pseudo R2 median ρ median p-value z-value p-value
realistically oriented gradient 1D 1 row 1 0.517 280 -0.99 9.54E-08 -9.9 2.08E-23 -0.98 0.00E+00 -9.9 2.08E-23 0.407 0.154 0.513 -0.74 2.19E-05 -9.9 2.08E-23
1D 2 rows 1 0.466 1019 -0.99 9.54E-08 -9.9 2.08E-23 -1.00 0.00E+00 -9.9 2.08E-23 0.373 0.161 0.458 -0.79 1.32E-11 -9.9 2.08E-23
2D 1 0.708 4154 0.50 1.43E-01 10.1 1.00E+00 -1.00 1.67E-02 -9.9 2.08E-23 0.000 0.266 0.269 0.03 7.43E-01 10.1 1.00E+00
1D 1 row 2 0.629 372 -0.89 6.10E-04 -9.9 2.08E-23 -0.96 2.78E-03 -9.9 2.08E-23 0.166 0.150 0.381 -0.42 3.26E-02 -5.5 1.90E-08
1D 2 rows 2 0.563 1339 -0.85 2.68E-03 -9.9 2.08E-23 -0.96 2.78E-03 -9.9 2.08E-23 0.137 0.143 0.314 -0.52 7.57E-05 -9.9 2.08E-23
2D 2 0.590 13103 -0.77 1.37E-02 -8.1 2.75E-16 -1.00 1.67E-02 -9.9 2.08E-23 0.016 0.256 0.288 0.17 3.41E-02 -5.1 1.70E-07
1D 1 row 3 0.611 395 -0.88 1.10E-03 -9.9 2.08E-23 -0.90 8.33E-02 3.9 1.00E+00 0.188 0.152 0.424 -0.44 2.15E-02 -7.7 6.80E-15
1D 2 rows 3 0.549 1412 -0.85 3.50E-03 -9.9 2.08E-23 -1.00 1.67E-02 -9.9 2.08E-23 0.155 0.151 0.359 -0.56 8.83E-06 -9.9 2.08E-23
2D 3 0.578 18626 -0.92 4.67E-04 -9.9 2.08E-23 -1.00 8.33E-02 10.1 1.00E+00 0.017 0.285 0.320 0.34 1.52E-06 -9.9 2.08E-23
inverse gradient 1D 1 row 2 0.438 259 -0.95 2.38E-05 -9.9 2.08E-23 -0.96 2.78E-03 -9.9 2.08E-23 0.175 0.077 0.284 0.67 1.95E-04 -9.9 2.08E-23
1D 2 rows 2 0.393 933 -0.95 2.93E-05 -9.9 2.08E-23 -1.00 3.97E-04 -9.9 2.08E-23 0.164 0.051 0.224 0.72 1.53E-09 -9.9 2.08E-23
2D 2 0.408 7988 -0.99 0.00E+00 -9.9 2.08E-23 -1.00 1.67E-02 -9.9 2.08E-23 0.029 0.040 0.074 0.67 2.97E-22 -9.9 2.08E-23
radial 1D 1 row 2 0.654 365 -0.98 1.54E-06 -9.9 2.08E-23 0.96 2.78E-03 -8.9 2.79E-19 0.743 0.013 0.745 0.00 9.49E-01 10.1 1.00E+00
1D 2 rows 2 0.659 1459 -0.99 5.93E-09 -9.9 2.08E-23 0.96 2.78E-03 -9.3 7.02E-21 0.703 0.006 0.705 0.00 9.54E-01 10.1 1.00E+00
2D 2 0.864 17693 -0.93 6.51E-05 -9.9 2.08E-23 -1.00 1.67E-02 -9.9 2.08E-23 0.099 0.020 0.126 0.59 7.49E-17 -9.9 2.08E-23
static 1D 1 row 2 0.528 319 -0.93 7.57E-05 -9.9 2.08E-23 0.85 2.38E-02 -2.3 1.07E-02 0.746 0.009 0.750 0.00 9.12E-01 10.1 1.00E+00
1D 2 rows 2 0.522 1266 -0.97 3.78E-06 -9.9 2.08E-23 0.46 3.02E-01 6.7 1.00E+00 0.724 0.003 0.730 0.00 9.27E-01 10.1 1.00E+00
2D 2 0.758 16283 -0.95 0.00E+00 -9.9 2.08E-23 -1.00 1.67E-02 -9.9 2.08E-23 0.215 0.010 0.236 0.62 6.41E-19 -9.9 2.08E-23
random 1D 1 row 2 0.515 307 -0.95 2.38E-05 -9.9 2.08E-23 -0.18 3.57E-01 7.1 1.00E+00 0.171 0.001 0.174 0.29 1.30E-01 3.9 1.00E+00
1D 2 rows 2 0.462 1096 -0.95 1.02E-05 -9.9 2.08E-23 -0.36 2.54E-01 6.7 1.00E+00 0.148 0.000 0.148 0.25 7.98E-02 1.3 9.03E-01
2D 2 0.549 12165 -0.84 4.46E-03 -9.9 2.08E-23 -1.00 1.67E-02 -8.5 9.48E-18 0.022 0.003 0.025 0.54 9.56E-14 -9.9 2.08E-23

This table lists the median values indicated by the box plots in Figs 4 to 7. Where applicable, the table additionally lists the associated median p-value of Spearman rank correlations as well as the z-value and p-value of a left-tailed sign test testing the distribution of rank correlation p-values for a median of α = 0.05. Background colours as in Table 1.