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. 2018 Nov 28;13(11):e0205275. doi: 10.1371/journal.pone.0205275

Table 3. Location and function of genes with RIDM (minimum-change 3%) and RIRE (minimum-change 0.1 RPKM) in nasal epithelial cells from children with asthma.

Gene CpG Position Chromosome Intron/exon Function*
AGPAT1 cg02525705 6p21.32 chr6:32145146 Intron 1/6 transferase activity, enzyme converts lysophosphatidic acid into phosphatidic acid
BAT3 cg24890294 6p21.33 chr6:31617323 Exon 3/25 control of apoptosis
NEU1 cg05550349 6p21.33 chr6:31828980 Exon 3/6 lysosomal enzyme
ANAPC11 cg08119847 17q25.3 chr17:79853461 Intron 3/3 ubiquitin ligase or transferase activity
MGST3 cg09553581 1q24.1 chr1:165603690 Intron 1/5 glutathione transferase or peroxidase activity
CCT6A cg23839680 7p11.2 chr7:56118238 prior Exon 1 poly(A) RNA and unfolded protein binding
MICB cg20240154 6p21.33 chr6:31464981 Intron 1/4 antigen and natural killer cell lectin-like receptor binding
SMN1 cg04281426 5q13.2 chr5:69345099 prior Exon 1/7 protein and RNA binding
LOC442454 cg03897851 Xp11.21 chrX:56764294 Intron 2/2 unknown
KLHL8 cg03129732 4q22.1 chr4:88084298 Exon 10/10 substrate-specific adapter for ubiquitination and degradation of RAPSN (Receptor Associated Protein of the Synapse)
SLC16A3 cg07012687 17q25.3 chr17:80195180 Exon 4/5 poly(A) RNA binding and transmembrane transporter activity
GP1BA cg07892449 17p13.2 chr17:4835627 Exon 1/2 Integrin alpha IIb beta3 signalling and thrombin receptor activity
DNAJC7 cg21219666 17q21.2 chr17:40166108 Intron 1/13 heat shock protein binding
VDAC2 cg20673929 10q22.2 chr10:76990994 Exon 11/11 nucleotide binding and voltage-gated anion channel activity
FBXO7 cg17197051 22q12.3 chr22:32870183 prior Exon 1/9 protein kinase binding and ubiquitin-protein transferase activity
TP53I3 cg22999525 2p23.3 chr2:24300821 Intron 4/4 protein homodimerization activity and transferase activity