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. Author manuscript; available in PMC: 2020 Jan 1.
Published in final edited form as: Anal Biochem. 2018 Oct 5;564-565:21–31. doi: 10.1016/j.ab.2018.10.001

Table 4.

Analysis of kinetics of VEGF165 binding to NRP-1.

A.
[VEGF165]
(nM)
to (s)
Fixed
Req ± SE
(RU)
Rmin ± SE
(RU)
kd ± SE
(s−1)
Red.
X2
Adj.
R2
100 57.6 13.9 ± 0.7 2.3 ± 0.1 9.0 ± 0.4 × 10 −2 1.75 0.66
50 14.2 ± 0.7 2.2 ± 0.1
25 8.8 ± 0.6 1.7 ± 0.1
12.5 6.1 ± 0.6 1.8 ± 0.1
6.25 4.3 ± 0.6 1.7 ± 0.1
B.
[VEGF165] (M)
Fixed
ka ± SE
(M−1s−1)
Rmax ± SE
(RU)
kd – Fixed
(s−1)
Red.
X2
Adj.
R2
KD ± SE
(nM)
1.00 × 10−7 3.6 ± 0.2 × 106 21.8 ± 0.4 9.0 × 10 −2 2.27 0.92 25 ± 2
5.00 × 10−8
2.50 × 10−8
1.25 × 10−8
6.25 × 10−9
C.
[VEGF165]
(nM)
to (s)
Fixed
Req ± SE
(RU)
Rmin ± SE
(RU)
kd ± SE
(s−1)
Red.
X2
Adj.
R2
100 54.9 22.3 ± 0.6 4.1 ± 0.1 6.5 ± 0.2 × 10−2 1.89 0.80
50 18.8 ± 0.5 2.0 ± 0.1
25 13.1 ± 0.5 2.9 ± 0.1
12.5 8.4 ± 0.5 2.6 ± 0.1
6.25 6.2 ± 0.5 2.5 ± 0.1
D.
[VEGF165] (M) Fixed ka ± SE
(M−1s−1)
Rmax ± SE
(RU)
kd – Fixed
(s−1)
Red.
X2
KD ± SE (nM)
1.00 × 10−7 2.64 ± 0.08 × 106 31.4 ± 0.4 6.5 × 10−2 2.38 25 ± 1
5.00 × 10−8
2.50 × 10−8
1.25 × 10−8
6.25 × 10−9

A. Dissociation phase analysis of VEGF165 from NRP-1 Fc chimera. Parameters obtained from global curve fitting (red lines Figure 5A) of dissociation data from NRP-1 Fc chimera (Equation 3). B. Association phase analysis of VEGF165 binding to NRP-1 Fc chimera. Parameters from global fitting of association phase data to equation 2 (red lines Figure 3.4A) and calculated affinity (KD = kd / ka). C. Dissociation phase analysis of VEGF165 from NRP-1 monomer. Parameters obtained from global curve fitting (red lines Figure 5C) of dissociation data from NRP-1 monomer (Equation 3). D. Association phase analysis of VEGF165 binding to NRP-1 monomer. Parameters from global fitting of association phase data to equation 2 (red lines Figure 3.4C) and calculated affinity (KD = kd / ka).