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Effects of SNPs and short indels identified in Sri Lankan L. donovani isolates on coding regions
| Variant type | Common to VL & CL | Unique to CL | Unique to VL |
|---|---|---|---|
| Frame shift | 52 | 15 | 31 |
| Stop gained | 21 | 3 | 7 |
| Stop lost | 8 | 2 | 4 |
| Start lost | 2 | 2 | 1 |
| Stop retained | 13 | 3 | 3 |
| Non synonymous coding | 12,046 | 1576 | 2804 |
| Synonymous coding | 12,181 | 1558 | 2507 |
| Initiator codon variant | 1 | – | – |
| Disruptive inframe deletion | 30 | 4 | 3 |
| Disruptive inframe insertion | 35 | 4 | 10 |
