Table 6.

Genes with highly variable copy numbers between L. donovani CL-WT and CL-PR

Chr	GeneID	CL-PR/CL-WT ratio	MWU-test p-value	Benjamini-Hochberg p-value	Product Description
32	LdBPK_323700	3.42	0.0032	0.0087	Hypothetical Protein, Conserved
34	LdBPK_044270	2.35	0.1976	0.2635	Hypothetical Protein, Conserved
17	LdBPK_081310	2.26	0.4180	0.4932	Hypothetical Protein, Conserved
34	LdBPK_341300	1.86	0.0102	0.0221	Hypothetical Protein, Conserved
1	LdBPK_010160	1.83	0.0167	0.0347	Lsm Domain Containing Protein, Putative
32	LdBPK_322060	1.80	0.0245	0.0471	Hypothetical Protein
34	LdBPK_341720	1.80	0.0839	0.1364	Amastin-Like Surface Protein, Putative (Fragment)
12	LdBPK_120667	1.79	0.0000	0.0000	Hypothetical Protein (Fragment)
12	LdBPK_120210	1.70	0.1487	0.2092	Hypothetical Protein, Conserved
19	LdBPK_191070	1.69	0.0054	0.0134	Hypothetical Protein, Unknown Function
9	LdBPK_090180	1.68	0.4268	0.4932	Atg8/Aut7/Apg8/Paz2, Putative
21	LdBPK_211640	1.68	0.0000	0.0001	Zinc Finger Domain-Like Protein
30	LdBPK_301560	1.68	0.3125	0.3964	Hypothetical Protein
8	LdBPK_080950	1.67	0.0981	0.1545	Cathepsin L-Like Protease (Fragment)
15	LdBPK_151140	1.66	0.0000	0.0000	Tryparedoxin Peroxidase