Skip to main content
. 2018 Oct 30;9(11):528. doi: 10.3390/genes9110528

Table A1.

Positions of domestication-related quantitative trait loci (QTL) mapped in different crosses between cultivated and wild sunflower and primitive and wild sunflower.

Trait Chr Nearest Marker or Flanking Markers Position (cM) LOD Interval a PVE b Reference
Days to flower 1 ORS605 17.2 10.8–21.5 3.0 Burke et al. (2002)
1 HT1018, c1774 - 0.0–21.0 10.8 Dechaine et al. (2009)
1 SFW09467 - 0.0–22.8 7.5 Corbi et al. (2018)
4 ORS615C 61.3 53.9–64.4 6.5 Burke et al. (2002)
6 ORS131 52.2 48.2–54.6 28.0 Burke et al. (2002)
6 ORS483 57.6 53.6–57.7 7.6 Wills and Burke (2007)
6 HT913 70.7 70.0–70.7 36 Baack et al. (2008)
6 HT918 64.5 58.9–68.5 26 Baack et al. (2008)
6 HT913, c2603 - 69.7–71.7 22.7 Dechaine et al. (2009)
6 HT913 - 96.7–100.1 27.4 Corbi et al. (2018)
7 ORS331 2.0 0.0–21.7 9.5 Burke et al. (2002)
7 ORS1041 1.0 0.0–5.3 2.5 Wills and Burke (2007)
7 ZVG29, c1533 - 0.0–9.0 10.3 Dechaine et al. (2009)
7 ZVG29 - 0.0–9.0 17.3 Corbi et al. (2018)
8 ORS70 52.7 49.3–59.0 5.5 Burke et al. (2002)
8 ORS536A, ORS154A 79.3 77.0–81.3 6.4 Burke et al. (2002)
8 HT71, ORS70 - 26.8–50.7 6.6 Dechaine et al. (2009)
8 SFW01442 - 44.6–78.9 13.9 Corbi et al. (2018)
9 ORS428, ORS64 11.3 0.0–18.8 5.6 Burke et al. (2002)
9 ORS176 53.5 49.5–54.3 3.3 Burke et al. (2002)
9a HT978 51.9 48.4–51.9 11 Baack et al. (2008)
9b HT978 52 38.9–52 15 Baack et al. (2008)
14a ORS398 12.9 9.0–19.6 10 Baack et al. (2008)
14b ORS398 14.8 12.0–17.6 30 Baack et al. (2008)
14 c1666, G13K16 - 9.8–37.4 8.2 Dechaine et al. (2009)
14 SFW02805 - 21.3–30.3 8.7 Corbi et al. (2018)
15 ORS687 57.1 57.0–58.2 46.9 Wills and Burke (2007)
17 ORS727 39.2 35.6–42.6 19.9 Burke et al. (2002)
17 ORS204A 58.9 50.9–64.9 21.8 Burke et al. (2002)
17 ORS735 37.5 33.3–39.5 9.0 Baack et al. (2008)
17 ORS561, ORS735 - 35.5–43.3 7.2 Dechaine et al. (2009)
17 SFW02587 - 73.2–78.4 16.0 Corbi et al. (2018)
Stem diameter 1 ORS718A, ORS53 14.8 4.8–39.5 7.8 Burke et al. (2002)
1 HT1018 7.0 4.6–10.4 10.0 Wills and Burke (2007)
1 ORS371, CRT391 - 23.0–39.1 12.7 Dechaine et al. (2009)
1 ORS371 - 49.7–55.0 8.9 Corbi et al. (2018)
2 ORS925 1.7 0.0–15.0 3.0 Wills and Burke (2007)
3 ORS333B 31.9 20.7–39.9 13.4 Burke et al. (2002)
3 ORS665 3.4 0.0–9.9 6.5 Wills and Burke (2007)
3 HT441 29.0 18.5–37.5 15 Baack et al. (2008)
3 HT1031, ORS949 - 4.0–36.4 7.5 Dechaine et al. (2009)
3 SFW01698 - 47.9–60.8 7.7 Corbi et al. (2018)
4 ORS963, HT298 - 0.0–10.0 6.5 Dechaine et al. (2009)
6 ORS131 52.2 46.4–60.6 4.4 Burke et al. (2002)
7 ORS331, ORS143 0.0 0.0–5.5 3.9 Burke et al. (2002)
8 HT668 43.8 37.8–46.8 8.0 Wills and Burke (2007)
9 SFW04878 - 116.1–118.1 7.1 Corbi et al. (2018)
10 ORS878, HT347 - 0.0–24.2 7.1 Dechaine et al. (2009)
11 ORS210 41.5 35.1–47.0 4.5 Burke et al. (2002)
12 c0019, c3115 - 36.0–49.9 8.9 Dechaine et al. (2009)
13a HT568, CRT504 - 0.0–24.8 10.6 Dechaine et al. (2009)
13b HT568, CRT504 - 0.0–28.8 9.9 Dechaine et al. (2009)
13 ORS511, ORS578 - 36.5–50.5 9.8 Dechaine et al. (2009)
13 SFW05467 - 5.9–16.4 10.9 Corbi et al. (2018)
15 ORS1141 56.4 52.4–58.2 15.7 Wills and Burke (2007)
17 ORS204A 64.9 54.9–67.8 7.6 Burke et al. (2002)
Height 1 ORS716 8.0 4.6–10.0 11.9 Wills and Burke (2007)
3 ORS134 19.3 13.3–26.7 11.3 Burke et al. (2002)
3 HT292 8.9 4.9–15.0 13.0 Baack et al. (2008)
3 c1144, HT1031 - 0.0–17.0 7.9 Dechaine et al. (2009)
3 SFW07426 - 16.5–17.5 10.6 Corbi et al. (2018)
6 ORS131, ORS608A 58.6 52.6–64.6 22.5 Burke et al. (2002)
6 ORS483 57.6 47.6–57.7 6.4 Wills and Burke (2007)
6 ORS57 68.5 61.7–70.5 14.0 Baack et al. (2008)
7 ORS555, ORS671F 15.6 7.6–21.7 15.6 Burke et al. (2002)
7 ORS331 8.4 3.9–14.3 9.0 Baack et al. (2008)
8 ZVG37 50.7 48.5–50.7 13.0 Baack et al. (2008)
8 HT656 - 33.3–41.6 12.5 Corbi et al. (2018)
9 ORS1265 10.0 2.0–19.0 3.0 Wills and Burke (2007)
10 ORS613, ORS818 50.7 46.7–62.2 5.3 Burke et al. (2002)
10 HT347 10.2 2.8–14.4 8.0 Baack et al. (2008)
10 HT419 30.7 26.7–32.7 9.0 Baack et al. (2008)
13 ORS45, ORS799 35.5 29.6–36.8 5.1 Burke et al. (2002)
13 HT568, CRT504 - 0.0–20.8 7.1 Dechaine et al. (2009)
13 SFW05467 - 15.4–16.4 8.3 Corbi et al. (2018)
14 HT319 16.1 10.1–18.0 3.0 Wills and Burke (2007)
14 c2693, c5666 - 0.0–12.2 10.5 Dechaine et al. (2009)
15 ORS687 57.1 57.0–58.2 39.4 Wills and Burke (2007)
17 ORS717 37.6 33.6–42.6 9.2 Burke et al. (2002)
Number of main stem leaves 1 ORS718A, ORS474 10.8 3.3–19.2 4.6 Burke et al. (2002)
6 ORS57, ORS131 50.2 18.2–52.2 28.1 Burke et al. (2002)
6 ORS483 57.6 55.6–57.7 4.9 Wills and Burke (2007)
7 ORS331, ORS555 4.0 0.0–7.5 13.3 Burke et al. (2002)
7 ORS1041 1.0 0.0–7.3 2.7 Wills and Burke (2007)
9 ORS176 53.5 49.5–54.3 5.2 Burke et al. (2002)
9 HT294 19.0 13.0–39.8 5.3 Wills and Burke (2007)
15 ORS687 57.1 57.1–58.2 57.0 Wills and Burke (2007)
17 ORS727 39.2 35.6–42.6 9.8 Burke et al. (2002)
Leaf number 4 ORS674, HT221 - 73.6–84.5 13.2 Dechaine et al. (2009)
4 SFW00857 - 105.0–121.4 11.8 Corbi et al. (2018)
6a HT913 70.7 69.2–70.7 25 Baack et al. (2008)
6b HT913 70.5 64.1–70.5 14 Baack et al. (2008)
7 ORS331 12.4 8.4–16.5 16 Baack et al. (2008)
7 ORS331, c1921 - 0.0–23.2 6.1 Dechaine et al. (2009)
7 SFW01658 - 33.6–45.9 7.7 Corbi et al. (2018)
11 SFW05043 - 113.7–118.7 6.0 Corbi et al. (2018)
12 c0019, c3115 - 36.0–49.9 12.3 Dechaine et al. (2009)
12 SFW09009 - 54.0–60.6 11.1 Corbi et al. (2018)
14 SFW03980 - 58.8–77.9 5.9 Corbi et al. (2018)
16 HT208, ORS172 - 100.2–110.3 11.4 Dechaine et al. (2009)
16 SFW04562 - 113.6–144.2 12.0 Corbi et al. (2018)
Leaf shape 4 c1258, HT989 - 22.1–34.1 9.87 Dechaine et al. (2009)
4 HT339, ORS674 - 44.1–61.6 7.70 Dechaine et al. (2009)
6 HT769 46.0 39.1–58.0 18.0 Baack et al. (2008)
12 ORS167, ORS256D 57.4 45.6–67.3 10.2 Burke et al. (2002)
12 c3115, HT490 - 40.0–60.1 9.9 Dechaine et al. (2009)
13 ORS388 4.0 0.0–10.0 21.0 Burke et al. (2002)
16 ORS899 20.0 8.4–31.9 19.0 Baack et al. (2008)
Leaf size (area) 3 ORS488, ORS244B 67.2 55.3–77.2 11.9 Burke et al. (2002)
3 HT441 29.0 19.7–41.0 11.0 Baack et al. (2008)
3 HT1031, ORS949 - 5.3–42.4 6.6 Dechaine et al. (2009)
4 ORS146 34.6 29.1–38.6 5.0 Burke et al. (2002)
4 ORS963, HT298 - 0.0–10.0 6.1 Dechaine et al. (2009)
5 ORS315B, ORS547 10.0 0.0–20.6 8.3 Burke et al. (2002)
5 ORS852 31.6 21.6–44.5 9.1 Wills and Burke (2007)
5 ORS852, ORS1120 - 19.1–51.1 8.6 Dechaine et al. (2009)
5 ORS1120, HT440 - 43.1–67.0 7.1 Dechaine et al. (2009)
8 ORS1161 35.6 32.4–35.8 5.6 Wills and Burke (2007)
9 ORS176 51.5 43.5–54.3 7.9 Burke et al. (2002)
10 ORS427 15.8 7.8–18.9 4.4 Wills and Burke (2007)
10 c1700, ORS878 - 2.0–20.2 10.0 Dechaine et al. (2009)
13 HT568, CRT505 - 0.0–29.7 9.1 Dechaine et al. (2009)
14 ORS307 10.1 3.1–18.0 4.9 Wills and Burke (2007)
15 ORS1141 57.0 50.5–58.2 3.7 Wills and Burke (2007)
16 ORS407 45.4 37.4–60.1 5.1 Wills and Burke (2007)
Leaf ratio 7 ZVG29 - 0.0–8.0 12.4 Corbi et al. (2018)
12 SFW09009 - 57.0–60.7 14.4 Corbi et al. (2018)
Peduncle length 10 ORS613 50.7 44.7–60.2 7.0 Burke et al. (2002)
17 ORS727 39.2 35.6–41.2 4.7 Burke et al. (2002)
17 EG825 48.9 44.6–65.8 5.7 Burke et al. (2002)
Branch number 3 c1144, HT1031 - 5.3–23.0 13.7 Dechaine et al. (2009)
3 HT1031, ORS949 - 4.0–42.4 7.9 Dechaine et al. (2009)
3 M23M12 - 31.3–45.0 12.2 Corbi et al. (2018)
4 SFW01149 - 55.9–63.0 8.9 Corbi et al. (2018)
6 ORS57 36.4 26.4–46.4 11.3 Burke et al. (2002)
7 ORS143 5.5 0.0–7.3 8.8 Burke et al. (2002)
9 CYC5B, ORS176 25.5–55.6 8.3 Dechaine et al. (2009)
9 CYC5A 94.2–105.2 9.9 Corbi et al. (2018)
10 ORS437 7.1 9.8–24.8 4.6 Wills and Burke (2007)
12 c3115, HT490 - 32.0–58.1 11.2 Dechaine et al. (2009)
12 SFW00213 - 59.7–80.8 17.7 Corbi et al. (2018)
13 ORS995, ORS45 27.6 19.6–35.5 7.0 Burke et al. (2002)
13 HT848 0.0 0.0–17.6 5.2 Wills and Burke (2007)
16 ORS899 30.1 22.0–36.1 7.0 Wills and Burke (2007)
16 HT208, ZVG75b - 86.2–110.3 10.1 Dechaine et al. (2009)
17 ORS737 22.0 16.0–30.1 8.4 Wills and Burke (2007)
Number of heads 3 HT1031, ORS949 - 11.31–45.31 7.0 Dechaine et al. (2009)
6 ORS1229 41.1 22.8–53.6 3.1 Wills and Burke (2007)
6 HT913 70.5 69.8–70.5 9.0 Baack et al. (2008)
7 ORS671F 17.6 7.5–21.7 9.4 Burke et al. (2002)
8 ORS147 29.5 19.5–35.2 5.9 Wills and Burke (2007)
8 HT656 - 32.3–48.6 9.4 Corbi et al. (2018)
9 ORS176 53.5 49.5–54.3 10.4 Burke et al. (2002)
9 HT978 52.0 47.0–52.0 9.0 Baack et al. (2008)
10 ORS437 15.8 11.8–18.9 28.1 Wills and Burke (2007)
12 ORS167 55.4 37.6–63.4 8.0 Burke et al. (2002)
12 c5456, c0019 - 30.5–61.1 10.8 Dechaine et al. (2009)
12 SFW03117 - 53.0–77.4 12.8 Corbi et al. (2018)
13 ORS995, ORS45 25.6 19.6–33.5 11.4 Burke et al. (2002)
13 HT848 0 0.0.2.0 5.3 Wills and Burke (2007)
13 ORS317 15.6 5.6–27.6 6.5 Wills and Burke (2007)
16 ORS993 34.1 28.1–45.4 3.4 Wills and Burke (2007)
17 ORS811 44.6 39.2–62.9 8.6 Burke et al. (2002)
17 ORS735 24.8 14.0–32.8 3.4 Wills and Burke (2007)
Number head/branch 6 ORS374, ORS57 54.6 46.4–64.6 6.5 Burke et al. (2002)
9 ORS176 53.5 43.5–54.3 4.9 Burke et al. (2002)
12 ORS167 53.4 35.6–61.4 7.3 Burke et al. (2002)
16 ORS343, ORS258A 60.1 38.6–68.9 7.6 Burke et al. (2002)
17 EG825 46.6 42.6–58.9 8.4 Burke et al. (2002)
Disc diameter 1 HT39 14.4 0.0–18.3 4.4 Wills and Burke (2007)
4 ORS785 51.9 45.3–57.9 4.6 Burke et al. (2002)
4 ORS366 16.3 10.1–23.0 11.0 Baack et al. (2008)
5 ORS315B, ORS240 12.0 0.0–21.5 5.7 Burke et al. (2002)
6 ORS381 53.6 45.6–57.7 4.9 Wills and Burke (2007)
6 HT913 70.4 69.4–70.4 11.0 Baack et al. (2008)
8 ORS456 35.2 32.4–45.8 9.0 Wills and Burke (2007)
9 ORS1265 17.0 8.0–22.5 7.7 Wills and Burke (2007)
9 HT978 52.0 48.4–52.0 16.0 Baack et al. (2008)
10 ORS437 13.8 7.8–17.1 13.0 Wills and Burke (2007)
13 ORS388 0.0 0.0–8.0 6.0 Burke et al. (2002)
14 ORS307 12.1 0.0–18.0 5.6 Wills and Burke (2007)
14a HT319 20.6 14.4–29.9 13.0 Baack et al. (2008)
14b HT319 20.6 11.5–30.7 9.0 Baack et al. (2008)
14 c0211, HT528 - 13.1–47.4 10.2 Dechaine et al. (2009)
15 ORS7 50.5 35.1–57.1 4.3 Wills and Burke (2007)
17 ORS565 4.0 0.0–10.0 5.5 Wills and Burke (2007)
Number of ray flowers 1 ORS662, ORS53 35.5 25.5–41.5 7.8 Burke et al. (2002)
1 HT446 12.0 6.0–22.9 12.0 Baack et al. (2008)
4 HT664 12.3 6.2–18.1 13.0 Baack et al. (2008)
5 ORS505 19.6 8.5–29.6 6.7 Wills and Burke (2007)
6 ORS57 48.2 40.4–64.6 7.2 Burke et al. (2002)
7 ORS143 4.0 0.0–9.6 10.1 Burke et al. (2002)
8 ORS147 32.4 23.5–41.8 3.1 Wills and Burke (2007)
9 ORS176 53.5 43.5–54.3 5.9 Burke et al. (2002)
10 ORS534 13.8 4.0–22.9 3.6 Wills and Burke (2007)
12 HT466 72.3 65.7–72.8 4.3 Wills and Burke (2007)
13 ORS388 0.0 0.0–8.0 6.9 Burke et al. (2002)
14 HT319 12.8 7.8–19.0 12.0 Baack et al. (2008)
15 ORS687 57.1 48.5–58.2 13.1 Wills and Burke (2007)
16 HT52 74.8 54.5–83.9 9.0 Baack et al. (2008)
17 ORS735 26.8 10.0–33.7 4.6 Wills and Burke (2007)
Ray size 5 ORS852, ORS1120 45.3 37.7–52.3 9.0 Burke et al. (2002)
6 ORS374 28.4 8.3–40.4 7.7 Burke et al. (2002)
9 ORS176 51.5 43.5–54.3 8.7 Burke et al. (2002)
Ray length 6 HT913 70.7 69.9–70.7 28.0 Baack et al. (2008)
9 ORS176 52.0 43.5–52.0 14.0 Baack et al. (2008)
9 CYC5B, ORS176 - 23.5–55.6 9.1 Dechaine et al. (2009)
13 HT568 0.0 0.0–6.0 10.0 Baack et al. (2008)
14 HT319 14.8 10.8–20.4 13.0 Baack et al. (2008)
16a HT52 74.8 63.8–84.4 8.0 Baack et al. (2008)
16b HT52 70.8 60.1–86.0 11.0 Baack et al. (2008)
Number of selfed seeds 1 HT39 14.4 8.0–30.3 6.6 Wills and Burke (2007)
8 ZVG34 15.5 6.2–29.5 5.4 Wills and Burke (2007)
12 HT466 72.3 65.7–72.8 6.8 Wills and Burke (2007)
17 ORS811 42.6 41.2–46.6 42.7 Burke et al. (2002)
17 ORS204A 58.9 54.9–62.9 68.0 Burke et al. (2002)
17 ORS735 18.0 10.0–33.7 7.2 Wills and Burke (2007)
Achene weight 1 HT1018 6.6 2.0–18.3 8.6 Wills and Burke (2007)
2 ORS423, ORS279 4.8 0.0–18.0 5.9 Burke et al. (2002)
3 ORS488 65.2 51.3–75.2 15.0 Burke et al. (2002)
3 c1144, ORS949 - 5.3–40.4 8.9 Dechaine et al. (2009)
3 M23M12 - 33.3–45.0 8.6 Corbi et al. (2018)
4 SFW03768 - 0.0–8.0 10.3 Corbi et al. (2018)
6 ORS131 52.6 48.2–64.6 5.6 Burke et al. (2002)
6 HT913 70.7 69.8–70.7 28.0 Baack et al. (2008)
8 ORS456 35.2 19.5–35.8 7.6 Wills and Burke (2007)
8 HT656 - 34.0–46.6 8.7 Corbi et al. (2018)
9 ORS176 53.5 47.5–54.3 13.7 Burke et al. (2002)
9 CYC5B, ORS176 - 49.6–55.6 9.3 Dechaine et al. (2009)
9 SFW04878 - 116.1–118.8 6.9 Corbi et al. (2018)
9 HT294 19.0 6.0–35.8 4.2 Wills and Burke (2007)
10 ORS815 39.3 28.8–44.7 12.4 Burke et al. (2002)
10 ORS437 15.8 9.8–18.9 19.0 Wills and Burke (2007)
10 ORS565 20.2 14.2–26.1 12.0 Baack et al. (2008)
12 ORS502 2.0 0.0–14.0 5.7 Burke et al. (2002)
17 ORS811 42.6 39.2–46.9 5.4 Burke et al. (2002)
Achene width 3 ORS124, ORS488 49.3 43.3–65.2 10.2 Burke et al. (2002)
6 ORS131 52.6 52.2–64.6 7.4 Burke et al. (2002)
8 ORS894 59.1 50.7–75.0 9.2 Burke et al. (2002)
9 ORS176 51.5 45.5–54.3 17.8 Burke et al. (2002)
13 ORS388 0.0 0.0–6.0 11.0 Burke et al. (2002)
Achene length 2 ORS925 0.0 0.0–7.0 13.0 Baack et al. (2008)
4 HT221 65.4 56.0–70.2 17.0 Baack et al. (2008)
5 ORS852, ORS1120 45.3 37.3–52.3 16.9 Burke et al. (2002)
5 ORS547 6.7 3.7–12.8 15.0 Baack et al. (2008)
10 ORS684 41.3 37.3–48.7 10.7 Burke et al. (2002)
13 HT568 0.0 0.0–24.3 15.0 Baack et al. (2008)
Shattering 4 HT298 0.0 0.0–4.0 10.7 Wills and Burke (2007)
4 ORS674 33.4 32.6–41.4 6.4 Wills and Burke (2007)
9 HT978 52.0 35.8–52.0 9.0 Baack et al. (2008)
10 ORS437 15.8 7.8–20.1 9.0 Wills and Burke (2007)
11 ORS5 31.0 23.0–45.7 6.6 Burke et al. (2002)
13 HT568 0.0 0.0–6.7 13.0 Baack et al. (2008)
16 ORS656 37.3 29.2–46.2 23.0 Baack et al. (2008)
17 ORS811 41.2 29.4–44.6 5.0 Burke et al. (2002)
Seed germination 12 HT466 72.3 71.4–72.8 17.3 Wills and Burke (2007)
15 ORS687 57.1 48.5–58.2 17.8 Wills and Burke (2007)
% oil content 4 ORS146 36.6 29.1–39.3 14.5 Burke et al. (2005)
% palmitic acid 6 HT769 26.3 18.4–41.7 15.8 Burke et al. (2005)
17 ORS727 39.6 33.8–43.1 10.7 Burke et al. (2005)
% stearic acid 6 ORS374 24.3 20.3–28.3 35.9 Burke et al. (2005)
10 ORS818 50.7 44.7–62.2 11.5 Burke et al. (2005)
% oleic acid 1 ORS718A, ORS474 19.5 3.3–25.5 10.1 Burke et al. (2005)
3 ORS488 63.3 41.9–69.3 12.7 Burke et al. (2005)
6 ORS374 22.3 16.4–28.3 24.0 Burke et al. (2005)
% linoleic acid 3 ORS124, ORS488 47.9 39.9–61.2 15.1 Burke et al. (2005)
6 ORS374 24.3 18.4–28.3 28.9 Burke et al. (2005)
Self-incompatibility 17 ORS735 89.1 - 66.2 Gandhi et al. (2005)
Self-pollination 6 ORS349 75.4 - 2.6 Gandhi et al. (2005)
15 ORS292 46.1 - 3.8 Gandhi et al. (2005)
17 ORS735 88.1 - 57.5 Gandhi et al. (2005)
Seed dormancy 3 ORS1222 25.1 - 9.7 Gandhi et al. (2005)
11 ZVG51 20.2 - 16.5 Gandhi et al. (2005)
15 HT284 63.0 - 12.1 Gandhi et al. (2005)

a 1-Logarithm of the odds (LOD) interval is shown, except for LOD interval reported by Dechaine et al. (2009) who presented 2-LOD interval; b Percentage of phenotypic variation explained (PVE) by a QTL.