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. 2018 Nov 23;9:2752. doi: 10.3389/fmicb.2018.02752

Table 1.

Bacterial strains and plasmids used in the present work.

Bacterial strain/plasmids Description Reference/origin
Escherichia coli
One Shot OmniMaxTM 2 T1 Host strain used for the maintenance of cloning plasmids: F′ proAB lacIq lacZΔM15 Tn10(TetR) Δ(ccdAB) mcrA, Δ(mrr,hsdRMS-mcrBC) ϕ80(lacZ)ΔM15 Δ(lacZYA-argF)U169 endA1 recA1 supE44 thi-1 gyrA96 relA1 tonA panD Invitrogen
S17-1λ pir Conjugative donor strain used for transferring plasmids to P. aeruginosa acceptor strains by conjugation assays: F thi pro hsdR hsdM+ recA RP42-Tc::Mu-Km::Tn7 Simon et al., 1986
S17 miniCTX::PpqsA-lux S17-1λ pir strain containing the miniCTX::PpqsA-lux plasmid Fletcher et al., 2007a,b
JM109-pSB1142 (LasR-based Biosensor) Biosensor strain used for detecting the QS signal, 3-oxo-C12-HSL, produced by P. aeruginosa strains Winson et al., 1998
JM109-pSB536 (RhlR-based Biosensor) Biosensor strain used for detecting the QS signal, C4-HSL, produced by P. aeruginosa strains Swift et al., 1997
Pseudomonas aeruginosa
PAO1 Wild-type PAO1-V clinic strain given from the lab of V. de Lorenzo Linares et al., 2005
PAO1 miniCTX::PpqsA-lux (PAO1_PpqsA) PAO1-V strain with the reporter construction PpqsA-luxCDABE inserted in the specific attB site of the chromosome Present work
JFL28 (nfxB) Spontaneous resistant mutant obtained from PAO1-V strain, which overproduces the MexCD-OprJ efflux system by punctual inactivating mutation in nfxB gene Linares et al., 2005
JFL28 miniCTX::PpqsA-lux (nfxB_PpqsA) JFL28 strain with the reporter construction PpqsA-luxCDABE inserted in the specific attB site of the chromosome Present work
nfxBΔmexD JFL28 strain with an inactive MexCD-OprJ efflux system by partial deletion of the mexD gene Present work
PAO1 CTX::PpqsA-lux::pqsA (PqsR-based Biosensor) PAO1-ΔpqsA strain with the reporter construction PpqsA-luxCDABE inserted in the specific attB site of the chromosome. Used for detecting the AQs produced by other P. aeruginosa strains Fletcher et al., 2007a,b
Plasmid
pGEM-T Easy Commercial plasmid used for cloning optimization of PCR products (AmpR) Promega
pGEM-T-ΔmexD pGEM-T Easy vector with the flanking DNA sequences of a 2058 bp inner region of mexD gene (AmpR) Present work
pEX18Ap Plasmid with conjugative properties used for deleting genes in P. aeruginosa by homolog recombination. AmpR Hoang et al., 1998
pEX18Ap-ΔmexD pEX18Ap vector with the flanking DNA sequences of a 2058 bp inner region of mexD gene used for deleting mexD gene in P. aeruginosa strains. AmpR Present work
Mini-CTX-lux-PpqsA Plasmid derived from mini-CTX-lux Becher and Schweizer (2000) in which the expression of the luxCDABE operon is under the transcriptional control of the pqsABCDE promoter region of P. aeruginosa. TcR Fletcher et al., 2007a,b
pSB1142 Plasmid carried by the LasR-Bioreporter strain necessary for detecting 3-oxo-C12-HSL. TcR Winson et al., 1998
pSB536 Plasmid carried by the RhlR-Bioreporter strain necessary for detecting C4-HSL. AmpR Swift et al., 1997