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. 2018 Nov 21;19:445. doi: 10.1186/s12859-018-2447-0

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© The Author(s). 2018

Open AccessThis article is distributed under the terms of the Creative Commons Attribution 4.0 International License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/) applies to the data made available in this article, unless otherwise stated.

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Fig. 2 — QTL (Q1, Q2) used as a basis to generate the interaction. In this example, QTL Q1 has been discarded, but QTL Q2 is still present in the final genotyping dataset. The phenotype is defined using the penetrance function corresponding to this 2 SNP