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. 2018 Nov 29;19:854. doi: 10.1186/s12864-018-5121-z

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© The Author(s). 2018

Open AccessThis article is distributed under the terms of the Creative Commons Attribution 4.0 International License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/) applies to the data made available in this article, unless otherwise stated.

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Fig. 3 — Presence of phage-related repeat PhRepA in the P. luminescens TT01, TT01m and DJC genome. a The PhRepA genes are organized in five clusters (A, B, C, D, E). Homologous clusters are drawn in similar color. (b, c) Detailed view of the prophage-related regions PhRepA in the P. luminescens TT01/TT01m (b) and DJC (c) genome. The different clusters are named with letters already used in the overview. The PhRepA regions can be subdivided into two parts, the “core region” (left of the vertical line) and the adhesion region (to the right). Normal = normal composition and presence of core genes; mod = modifications of the normal composition and presence of core genes. Homologous genes are displayed in similar colors. See text for details