Table 2.
Marker | MAF | NG | NA | HO | HE | PIC |
---|---|---|---|---|---|---|
GBSSR-VF-8 | 0.17 | 17 | 15 | 0.28 | 0.89 | 0.88 |
GBSSR-VF-19 | 0.50 | 6 | 6 | 0.00 | 0.66 | 0.61 |
GBSSR-VF-20 | 0.42 | 8 | 9 | 0.09 | 0.74 | 0.71 |
GBSSR-VF-21 | 0.38 | 6 | 6 | 0.06 | 0.74 | 0.70 |
GBSSR-VF-22 | 0.47 | 7 | 8 | 0.03 | 0.71 | 0.67 |
GBSSR-VF-32 | 0.66 | 5 | 5 | 0.00 | 0.54 | 0.51 |
GBSSR-VF-34 | 0.65 | 6 | 6 | 0.00 | 0.56 | 0.53 |
GBSSR-VF-38 | 0.69 | 7 | 7 | 0.10 | 0.49 | 0.46 |
GBSSR-VF-52 | 0.47 | 7 | 7 | 0.00 | 0.69 | 0.65 |
GBSSR-VF-84 | 0.58 | 4 | 4 | 0.00 | 0.60 | 0.56 |
GBSSR-VF-113 | 0.38 | 7 | 7 | 0.00 | 0.76 | 0.73 |
GBSSR-VF-115 | 0.34 | 10 | 9 | 0.03 | 0.79 | 0.76 |
GBSSR-VF-119 | 0.28 | 6 | 6 | 0.00 | 0.80 | 0.77 |
GBSSR-VF-131 | 0.30 | 8 | 8 | 0.06 | 0.80 | 0.78 |
GBSSR-VF-149 | 0.47 | 9 | 9 | 0.00 | 0.73 | 0.70 |
GBSSR-VF-153 | 0.50 | 4 | 4 | 0.00 | 0.67 | 0.62 |
GBSSR-VF-154 | 0.47 | 7 | 7 | 0.06 | 0.71 | 0.68 |
GBSSR-VF-159 | 0.41 | 5 | 5 | 0.00 | 0.70 | 0.65 |
GBSSR-VF-164 | 0.52 | 8 | 7 | 0.06 | 0.67 | 0.64 |
GBSSR-VF-168 | 0.25 | 10 | 11 | 0.13 | 0.81 | 0.78 |
GBSSR-VF-172 | 0.30 | 18 | 14 | 0.44 | 0.85 | 0.84 |
GBSSR-VF-173 | 0.52 | 7 | 7 | 0.09 | 0.66 | 0.63 |
GBSSR-VF-175 | 0.23 | 13 | 12 | 0.25 | 0.82 | 0.80 |
GBSSR-VF-180 | 0.50 | 5 | 5 | 0.09 | 0.66 | 0.61 |
GBSSR-VF-184 | 0.61 | 5 | 5 | 0.03 | 0.56 | 0.51 |
GBSSR-VF-185 | 0.91 | 3 | 3 | 0.06 | 0.17 | 0.17 |
GBSSR-VF-190 | 0.56 | 9 | 9 | 0.28 | 0.64 | 0.61 |
GBSSR-VF-203 | 0.91 | 2 | 2 | 0.00 | 0.17 | 0.16 |
GBSSR-VF-209 | 0.77 | 4 | 4 | 0.03 | 0.39 | 0.35 |
GBSSR-VF-213 | 0.47 | 5 | 5 | 0.00 | 0.69 | 0.64 |
GBSSR-VF-215 | 0.72 | 3 | 3 | 0.00 | 0.44 | 0.39 |
GBSSR-VF-216 | 0.75 | 2 | 2 | 0.00 | 0.38 | 0.30 |
GBSSR-VF-218 | 0.81 | 2 | 2 | 0.00 | 0.30 | 0.26 |
GBSSR-VF-220 | 0.68 | 4 | 4 | 0.06 | 0.50 | 0.46 |
GBSSR-VF-221 | 0.45 | 7 | 6 | 0.13 | 0.68 | 0.63 |
GBSSR-VF-237 | 0.63 | 6 | 5 | 0.09 | 0.56 | 0.53 |
GBSSR-VF-245 | 0.72 | 5 | 5 | 0.00 | 0.45 | 0.42 |
GBSSR-VF-255 | 0.75 | 4 | 4 | 0.00 | 0.41 | 0.37 |
GBSSR-VF-258 | 0.56 | 6 | 6 | 0.13 | 0.63 | 0.60 |
GBSSR-VF-262 | 0.44 | 11 | 10 | 0.25 | 0.74 | 0.71 |
GBSSR-VF-263 | 0.41 | 8 | 8 | 0.19 | 0.70 | 0.65 |
GBSSR-VF-266 | 0.59 | 4 | 4 | 0.00 | 0.58 | 0.53 |
GBSSR-VF-270 | 0.69 | 3 | 3 | 0.00 | 0.48 | 0.43 |
GBSSR-VF-271 | 0.38 | 10 | 8 | 0.22 | 0.74 | 0.70 |
GBSSR-VF-276 | 0.72 | 3 | 3 | 0.00 | 0.44 | 0.40 |
GBSSR-VF-285 | 0.73 | 5 | 5 | 0.26 | 0.45 | 0.43 |
GBSSR-VF-288 | 0.64 | 5 | 5 | 0.03 | 0.53 | 0.49 |
GBSSR-VF-293 | 0.78 | 3 | 3 | 0.00 | 0.35 | 0.31 |
GBSSR-VF-295 | 0.70 | 5 | 5 | 0.03 | 0.47 | 0.43 |
GBSSR-VF-297 | 0.59 | 8 | 6 | 0.16 | 0.59 | 0.55 |
GBSSR-VF-298 | 0.72 | 3 | 3 | 0.00 | 0.44 | 0.40 |
GBSSR-VF-311 | 0.72 | 7 | 6 | 0.09 | 0.45 | 0.42 |
GBSSR-VF-312 | 0.69 | 2 | 2 | 0.00 | 0.43 | 0.34 |
GBSSR-VF-319 | 0.80 | 4 | 4 | 0.03 | 0.35 | 0.32 |
GBSSR-VF-323 | 0.66 | 7 | 6 | 0.23 | 0.52 | 0.49 |
Mean | 0.563 | 6.3 | 6.0 | 0.074 | 0.587 | 0.550 |
(MAF ), Major allele frequency; (NG), number of genotype; (NA), number of allele; (HO), observed heterozygosity; (HE), expected heterozygosity; (PIC), polymorphic information content.