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. 2014 Dec 8;19(12):20424–20467. doi: 10.3390/molecules191220424

Table 2.

Non exhaustive list of PAMAM dendrimer simulations and their radius of gyration. For comparison the experimental values obtained by SAXS and SANS are displayed on top.

FF Solvent G0 G1 G2 G3 G4 G5 G6 G7 G8 G9 G10 Source
SAXS Methanol 15.8 17.1 24.1 26.3 31.9 40.3 49.2 57.4 [86]
SAXS Methanol 4.0 7.9 11.8 15.09 18.60 23.07 27.50 32.11 38.58 - - [116]
SANS D2O - - - - 20.90–21.30 - - - - - - [117]
SANS D2O pH 4.97–10.25 - - - - 20.64–21.58 - - - - - - [111]
SANS D2O pH 4.7–10.1 - - - - - - - - 38.1–40.7 - - [112]
SANS Different solvents - - - - - 22.1 - - 32.8–43.8 - - [118]
DREIDING Vacuum 4.93 7.46 9.17 11.23 14.50 18.34 22.40 29.09 36.42 46.03 55.19 [10]
DREIDING optimized QM Water explicit - - - - 21.07–22.11 - - - - - - [85]
DREIDING Water implicit 4.97 7.03 9.77 13.01 16.36 21.67 27.62 - - - - [35]
DREIDING Water explicit High pH - 7.4 11.5 12.9 16.9 20.3 24.7 30.1 - - - [119]
DREIDING Water explicit Low pH - 9.4 13.6 17.2 21.1 26.1 32.5 37.57 - - - [119]
CHARMM 27 Water explicit - - - 15.33 21.04 25.50 30.18 - - - - [95]
AMBER Water explicit pH 7.4 - - - 16.25 18.8–20 22.43–22.9 27.2 - - - - [50]
AMBER Water explicit pH 5 - - - - 21.0 24.2 28.9 - - - - [50]
DREIDING Water explicit pH 4–12 - - - - - - - 37.8–43.11 - - [120]
Coarse-Grained (MARTINI) Water explicit - - - - 20.1 25.6 - - - - - [59]
Coarse-Grained Water explicit - - - 13.1 - 23.20 - - - - - [60]
DREIDING Water explicit pH 12 - - - - 16.78 20.67 26.76 - - - - [110]
DREIDING Water explicit pH 7 - - - - 17.01 22.19 27.28 - - - - [110]
DREIDING Water explicit pH 4 - - - - 19.01 24.76 30.89 - - - - [110]
CVFF Water implicit Low pH - - 16.6 22.8 29.9 38.0 46.8 - - - - [87]
CVFF Water implicit Neutral pH - - 14.5 19.7 26.7 32.8 41.3 - - - - [87]
CVFF Water implicit High pH - - 8.4 11.6 14.8 18.3 24.2 - - - - [87]
OPLS Vacuum - - 11.0 13.7 - - - - - - - [121]