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Batch effect indicated by HcKmer on samples sequenced in two Illumina Flowcells: Leaf labels denote cell type (fib = Fibroblasts, jur = Jurkat cells) and number of individual, lane number and Flowcell label (d24a and c0yr). Samples from Jurkat cells are highlighted in grey. The tree clearly separates Flowcell d24a and c0yr although Flowcell c0yr contains two different cell types.
