TABLE 1.
Log2 RPKM values for pooled carotenoid-related gene transcripts within each clade
| Gene name | Log2 RPKM values |
||
|---|---|---|---|
| acI-A | acI-B | acI-C | |
| crtE | 3.69 | 4.93 | 6.48 |
| crtB | 2.74 | 3.45 | 6.62 |
| crtI | 4.33 | 5.93 | 6.90 |
| crtYc | 1.57 | 5.62 | 7.07 |
| crtYd | NDa | 3.29 | 4.02 |
| blh | 0.07 | 2.06 | NAb |
| actR | 14.36 | 13.86 | 12.52 |
| crtD | 3.30 | 3.93 | 4.03 |
| crtA | 2.11 | 3.39 | 5.24 |
| cruF | 2.63 | 3.85 | 5.59 |
| cruG | 2.90 | 3.62 | 4.51 |
| Putative acyltransferase | 2.64 | 4.04 | 5.37 |
| recA | 7.85 | 9.16 | 10.09 |
a
ND, not determined; gene is present in clade member assemblies but no transcript was mapped.
b
NA, not applicable; gene is not present in any clade member assembly.