Table 2.
Details of GWAS-identified and animal model-verified significant markers for oocyst output (OoC) from the intercross chickens following secondary challenge with the heterologous E. maxima W strain.
| Trait | Marker | Location (Chr:mb) | GA (P-value) |
|---|---|---|---|
| OoC | Affx-50382738 | 1:55145901 | 0.82 (<0.001) |
| Affx-50382750 | 1:55150313 | 0.82 (<0.001) | |
| Affx-50382770 | 1:55160683 | 0.82 (<0.001) | |
| Affx-50382803 | 1:55177556 | 0.82 (<0.001) | |
| Affx-50382825 | 1:55192552 | 0.82 (<0.001) | |
| Affx-50382867 | 1:55217464 | 0.82 (<0.001) | |
| Affx-50382871 | 1:55220484 | 0.82 (<0.001) | |
| Affx-50382878 | 1:55224572 | 0.82 (<0.001) | |
| Affx-50382880 | 1:55225227 | 0.82 (<0.001) | |
| Affx-50382881 | 1:55225894 | 0.82 (<0.001) | |
| Affx-50382786 | 1:55169757 | 0.82 (<0.001) |
Details provided: Affymetrix marker identifier; chromosome and position of markers in the Galgal5 assembly (Chr:mb); additive genetic effects (GA), with significance values (P-value).